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Quantification of uncertainty in microbial data—reporting and regulatory implications

2008· article· en· W1588056719 on OpenAlexfundno aff
Monica B. Emelko, Philip J. Schmidt, J. Alan Roberson

Bibliographic record

VenueAmerican Water Works Association · 2008
Typearticle
Languageen
FieldEnvironmental Science
TopicFecal contamination and water quality
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsOrganismBiochemical engineeringEnvironmental scienceContaminationComputer scienceSampling (signal processing)Environmental chemistryData miningEcologyBiologyChemistryEngineering

Abstract

fetched live from OpenAlex

Microbial contaminants are often regulated differently than chemical contaminants. Microorganisms are enumerated by techniques that are frequently susceptible to considerable losses, resulting in highly variable recoveries. Accordingly, several treatment technique‐based regulations have evolved for microbial treatment. However, even these regulations ultimately require some reliance on microbial concentration data. Statistical approaches have been developed for the calculation of confidence intervals for microbial concentrations and removals by treatment processes, and these approaches take into account the various errors associated with microbial enumeration. The approaches were used here to demonstrate the relationship between methodological error and the practicality of concentration‐based regulations that require continuous and/or frequent monitoring, demonstrate the necessity of treatment technique‐based regulations such as the Long Term 2 Enhanced Surface Water Treatment Rule, demonstrate that methodological uncertainty is more substantially reduced by increasing organism count than by improving methodological recovery, and propose sampling targets of approximately 10 or more organisms to appreciably reduce the uncertainty associated with microbial quantification

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.235
metaresearch head score (Gemma)0.434
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Reporting · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.765
Threshold uncertainty score0.944

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.2350.434
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0060.007
Science and technology studies0.0010.008
Scholarly communication0.0100.009
Open science0.0060.004
Research integrity0.0040.006
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.280
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designTheoretical or conceptual
DomainReporting
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations31
Published2008
Admission routes1
Has abstractyes

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