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Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement

2013· article· en· 1,271 citations· W1973408460 on OpenAlex· 10.1038/nbt.2491

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Abstract

Chickpea (Cicer arietinum) is the second most widely grown legume crop after soybean, accounting for a substantial proportion of human dietary nitrogen intake and playing a crucial role in food security in developing countries. We report the ∼738-Mb draft whole genome shotgun sequence of CDC Frontier, a kabuli chickpea variety, which contains an estimated 28,269 genes. Resequencing and analysis of 90 cultivated and wild genotypes from ten countries identifies targets of both breeding-associated genetic sweeps and breeding-associated balancing selection. Candidate genes for disease resistance and agronomic traits are highlighted, including traits that distinguish the two main market classes of cultivated chickpea--desi and kabuli. These data comprise a resource for chickpea improvement through molecular breeding and provide insights into both genome diversity and domestication.

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The record

Venue
Nature Biotechnology
Topic
Genetic and Environmental Crop Studies
Field
Agricultural and Biological Sciences
Canadian institutions
University of SaskatchewanNational Research Council Canada
Funders
Universidad de CórdobaRural Development AdministrationConsortium of International Agricultural Research CentersSaskatchewan Pulse GrowersIndian Council of Agricultural ResearchU.S. Department of AgricultureMinistry of Agriculture - SaskatchewanEuropean Regional Development FundNational Institute of Food and AgricultureInstituto Nacional de Investigación y Tecnología Agraria y AlimentariaNational Science Foundation
Keywords
BiologyCropDomesticationBiotechnologyWhole genome sequencingPlant disease resistanceTraitGenomeGenetic resourcesGenetic diversityAgronomyGeneticsGenePopulation
Has abstract in OpenAlex
yes