Species richness estimation of bird communities: how to control for sampling effort?
Bibliographic record
Abstract
Since estimates of total species richness increase with sampling effort, methods to control for this sampling effect need to be tested and used. We present seven non‐parametric and 12 accumulation curve methods that have been used recently in the ecological literature. To test their performance, we used data from bird communities in the Queen Charlotte Islands, Canada. The performance of each method was evaluated by calculating the bias and precision of its estimates against the known total species richness. For our data set, the two Chao estimators were the overall least biased and most precise estimation methods, followed by the two jackknife estimators, thus supporting results of previous studies. Nonparametric estimators tended to perform better than accumulation curve models. Most estimation methods had the problem that they tended to underestimate species richness for early samples, but slightly overestimated it for late samples. We briefly discuss the practical use of these methods which may greatly increase our ability to answer ecological questions and to guide conservation decisions, especially for species‐rich tropical bird communities.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.146 | 0.321 |
| Meta-epidemiology (narrow) | 0.002 | 0.001 |
| Meta-epidemiology (broad) | 0.003 | 0.002 |
| Bibliometrics | 0.003 | 0.004 |
| Science and technology studies | 0.001 | 0.002 |
| Scholarly communication | 0.001 | 0.004 |
| Open science | 0.003 | 0.002 |
| Research integrity | 0.002 | 0.001 |
| Insufficient payload (model declined to judge) | 0.001 | 0.001 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".