MétaCan
Menu
Back to cohort

Robust estimation of breeding values in a random regression test‐day model

2004· article· en· W2021644725 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueJournal of Animal Breeding and Genetics · 2004
Typearticle
Languageen
FieldMathematics
TopicAdvanced Statistical Methods and Models
Canadian institutionsUniversity of Guelph
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsOutlierBest linear unbiased predictionStatisticsStandard deviationMathematicsStandard errorLinear regressionRegression analysisRegressionEstimationEconometricsSelection (genetic algorithm)Computer scienceArtificial intelligence

Abstract

fetched live from OpenAlex

Summary Two robust estimation procedures were applied to a random regression test‐day model to reduce the effects of test‐day records that are generally labelled as outliers. One robust procedure consisted of estimating residuals (actual observation minus predicted) from the genetic evaluation model, computing the standard deviation of residuals across all records, and restricting the outlier residuals to be within k standard deviations. Thus, a new observation is created for use in the genetic evaluation model. The process is part of the iterations on data to obtain solutions to mixed model equations until no more outliers beyond k standard deviations exist. Four different values of k were examined. The second robust procedure utilizes different weights with each test‐day record. Weights are estimated from the residuals for all observations. Outliers tend to receive smaller weights, and thus, their influence tends to be reduced. In this study, eleven different weight formulas were compared. The objectives were to apply the robust procedures to test‐day milk yield records of Canadian Jersey cattle and to determine the effects on estimated breeding values (EBVs) and rankings of animals. Results were compared to usual best linear unbiased prediction (BLUP) ignoring the outlier problem.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.473
Threshold uncertainty score0.405

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.148
GPT teacher head0.398
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it