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Record W2029114055 · doi:10.1109/tit.2004.830782

Monotonicity-Based Fast Algorithms for MAP Estimation of Markov Sequences Over Noisy Channels

2004· article· en· W2029114055 on OpenAlexaff
Xiaolin Wu, Sorina Dumitrescu, Z. Wang

Bibliographic record

VenueIEEE Transactions on Information Theory · 2004
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicDNA and Biological Computing
Canadian institutionsMcMaster University
Fundersnot available
KeywordsMaximum a posteriori estimationAlgorithmMarkov chainMathematicsDecoding methodsComputational complexity theorySequence (biology)Directed acyclic graphForward algorithmMonotonic functionMarkov modelVariable-order Markov model

Abstract

fetched live from OpenAlex

In this correspondence, we study algorithmic approach to solving the problem of maximum a posteriori (MAP) estimation of Markov sequences transmitted over noisy channels, which is also known as the MAP decoding problem. For the class of memoryless binary channels that produce independent substitution and erasure errors, the MAP sequence estimation problem can be formulated and solved as one of the longest path in a weighted directed acyclic graph. But for algorithm efficiency, we transform the graph problem to one of matrix search. If the underlying matrix is totally monotone, then the complexity of MAP sequence estimation can be greatly reduced. We give a sufficient condition for the matrix induced by MAP sequence estimation to be totally monotone, which is indeed the case if the input sequence is Gaussian Markov. Under this condition, the complexity of MAP decoding can be reduced from O(N/sup 2/M) to O(NM), where N is the size of source alphabet and M is the length of input sequence. Furthermore, for Markov sequences of fixed-length code we propose a block parsing strategy to reduce the complexity of MAP sequence estimation to O(M+N/sup 2/M/logM) or to O(M+NM/logM), depending on if the total monotonicity holds. Another significance of this correspondence lies in the applicability of the presented algorithmic approach, which has been thoroughly studied in computer science literature, to many other discrete optimization problems encountered in both source and channel coding, ranging from optimal multiresolution and multiple-description quantizer design, to context quantization for minimum conditional entropy, and to optimal packetization with uneven error protection.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.015
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.003
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.015
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.002
Science and technology studies0.0010.002
Scholarly communication0.0010.004
Open science0.0020.003
Research integrity0.0020.003
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.254
Teacher spread0.244 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations25
Published2004
Admission routes1
Has abstractyes

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