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Record W2071717141 · doi:10.1086/339512

Genetic Diversity among Natural and Cultivated Field Populations and Seed Lots of American Ginseng (<i>Panax quinquefolius</i>L.) in Canada

2002· article· en· W2071717141 on OpenAlexafffundabout
Cayetana Schluter, Zamir K. Punja

Bibliographic record

VenueInternational Journal of Plant Sciences · 2002
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGinseng Biological Effects and Applications
Canadian institutionsSimon Fraser University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsBiologyRAPDGenetic diversityOutcrossingGinsengPopulationGenetic variationBotanyNatural population growthPopulation geneticsHorticultureVeterinary medicineGenetics

Abstract

fetched live from OpenAlex

Genetic diversity within Canadian‐grown North American ginseng (Panax quinquefolius L.) was evaluated using random amplified polymorphic DNA (RAPD) markers. Fifteen primers that produced 35 highly repeatable polymorphic markers were used to screen over 600 plant samples from various Canadian ginseng farms and seed lots. Ten samples from a Wisconsin seed lot and 58 samples from three natural ginseng populations in Quebec were also included for comparison. Genetic distance values, estimated as the complement to the simple matching coefficient, within cultivated populations ranged from 0.21 for a population in Nova Scotia to 0.34 for a British Columbia population, with an overall mean of 0.3. Distance values within three natural populations were either similar (0.33) or lower (0.12, 0.19) when compared with cultivated populations, indicating that populations under cultivation have not undergone a reduction in overall genetic diversity. However, one RAPD marker was polymorphic only in natural populations. Monotonic multidimensional scaling and χ2 analyses indicated that natural populations were genetically distinct from cultivated ones. Individual plants originating as seeds from the same mother plant had much lower genetic diversity (mean of 0.18) compared with individual field‐grown plants chosen at random from the same farm. Segregation of some RAPD markers was observed among the progeny, indicating that parental plants have some degree of heterozygosity and that a level of outcrossing may be present. Estimates of the component for genetic diversity between populations (G′ST) were 18.0% and 28.0% for cultivated and natural populations, respectively; much of the variation was detected within and not between populations. These results imply that North American ginseng is a heterogeneous mix of genetic material and that the observed genetic diversity in cultivated populations in Canada results largely from the mixing of different seed lots. In addition, heterozygosity within the parent plants and cross‐pollination appear also to contribute to genetic variation in this species.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.123
Threshold uncertainty score0.247

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.241
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations42
Published2002
Admission routes3
Has abstractyes

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