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Record W2106477565 · doi:10.1002/mas.10034

Nanoscopic aspects of radiobiological damage: Fragmentation induced by secondary low‐energy electrons

2002· review· en· W2106477565 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueMass Spectrometry Reviews · 2002
Typereview
Languageen
FieldEngineering
TopicIon-surface interactions and analysis
Canadian institutionsCanadian Institutes of Health ResearchUniversité de Sherbrooke
Fundersnot available
KeywordsChemistryBiomoleculeMoleculeFragmentation (computing)RadicalChemical physicsIonDissociation (chemistry)ElectronAtomic physicsPhysical chemistryOrganic chemistry

Abstract

fetched live from OpenAlex

Abstract I. Introduction 349 II. Experimental Methods 352 A. Thin‐Film Preparation 352 B. Electron‐Stimulated Desorption (ESD) of Ions and Neutral Species 353 C. Analysis by Electrophoresis 354 III. Interpretation of the Dependence of Ion and Neutral Yields on Incident Electron Energy 354 IV. Results and Discussion 356 A. Desorption of Ions and Neutral Species from Water‐Ice Films Induced by Low‐Energy Electrons (LEEs) 356 B. Anion ESD from Thin Films of Deoxyribose Analogs 358 C. Anion ESD from Thin Films of DNA Bases 359 D. Neutral‐Species Desorption from Short Single‐DNA Strands Induced by LEEs 360 E. Sequence‐Specific Damage Induced by LEE Impact on Oligonucleotides 362 F. Anion ESD from the Peptide and Disulfide Bridges of Proteins 364 G. LEE Damage to Plasmid DNA 365 V. Summary and Conclusions 366 Acknowledgments 367 References 367 Low‐energy electrons (LEEs) are produced in large quantities in any type of material irradiated by high‐energy particles. In biological media, these electrons can fragment molecules and lead to the formation of highly reactive radicals and ions. The results of recent experiments performed on biomolecular films bombarded with LEEs under ultra‐high vacuum conditions are reviewed in the present article. The major type of experiments, which measure fragments produced in such films as a function of incident electron energy (0.1–45 eV), are briefly described. Examples of the results obtained from DNA films are summarized along with those obtained from the fragmentation of elementary components of the DNA molecule (i.e., thin solid films of H 2 O, DNA bases, sugar analogs, and oligonucleotides) and proteins. By comparing the results of these different experiments, it is possible to determine fundamental mechanisms that are involved in the dissociation of biomolecules and the production of single‐ and double‐strand breaks in DNA, and to show that base damage is dependent on the nature of the bases and on their sequence context. Below 15 eV, electron resonances (i.e., the formation of transient anions) play a dominant role in the fragmentation of all biomolecules investigated. These transient anions fragment molecules by decaying into dissociative electronically excited states or by dissociating into a stable anion and a neutral radical. These fragments usually initiate other reactions with nearby molecules, causing further chemical damage. The damage caused by transient anions is dependent on the molecular environment. © 2003 Wiley Periodicals, Inc., Mass Spec Rev 21:349–369, 2002; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/mas.10034

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.981
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0030.001
Bibliometrics0.0010.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0050.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.282
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it