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A Large Pseudoautosomal Region on the Sex Chromosomes of the Frog Silurana tropicalis

2013· article· en· 32 citations· W2119635059 on OpenAlex· 10.1093/gbe/evt073

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A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

Canadian affiliationAn author listed a Canadian institution. This is the only route the usual frame has.
Canadian funderA Canadian agency funded it. The work may carry no Canadian affiliation at all.

The three-model screen

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All three models called this out of scope.

stratum: aff_core · design weight: 5595.24 (the sample is stratified; any rate computed without the weight is wrong)
Claude Opus 4.8OUT
genre: empirical
about Canada: no
confidence: high

Genomics study of the pseudoautosomal region on frog sex chromosomes.

GPT-5.6 (high)OUT
genre: empirical
about Canada: no
confidence: high

It investigates frog sex chromosomes, not research itself.

Grok 4.5OUT
genre: empirical
about Canada: no
confidence: high

Genetics of frog sex chromosomes; organismal biology, not research methods or system.

Abstract

Sex chromosome divergence has been documented across phylogenetically diverse species, with amphibians typically having cytologically nondiverged ("homomorphic") sex chromosomes. With an aim of further characterizing sex chromosome divergence of an amphibian, we used "RAD-tags" and Sanger sequencing to examine sex specificity and heterozygosity in the Western clawed frog Silurana tropicalis (also known as Xenopus tropicalis). Our findings based on approximately 20 million genotype calls and approximately 200 polymerase chain reaction-amplified regions across multiple male and female genomes failed to identify a substantially sized genomic region with genotypic hallmarks of sex chromosome divergence, including in regions known to be tightly linked to the sex-determining region. We also found that expression and molecular evolution of genes linked to the sex-determining region did not differ substantially from genes in other parts of the genome. This suggests that the pseudoautosomal region, where recombination occurs, comprises a large portion of the sex chromosomes of S. tropicalis. These results may in part explain why African clawed frogs have such a high incidence of polyploidization, shed light on why amphibians have a high rate of sex chromosome turnover, and raise questions about why homomorphic sex chromosomes are so prevalent in amphibians.

Stored with the screening record, where it is evidence for the labels above.

The record

Venue
Genome Biology and Evolution
Topic
Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
Field
Biochemistry, Genetics and Molecular Biology
Canadian institutions
McMaster University
Funders
National Institute on Deafness and Other Communication DisordersMedical Research CouncilMinistero dello Sviluppo EconomicoMinisterstvo ZemědělstvíOntario Ministry of Economic Development and InnovationMcMaster UniversityUniverzita Karlova v Praze
Keywords
Pseudoautosomal regionBiologyEvolutionary biologyZoologyGeneticsGeneX chromosome
Has abstract in OpenAlex
yes