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First report of <i>Ilyonectria</i> sp. affecting foliage of <i>Tulipa</i>

2014· article· en· W2121431744 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

aboutThe title or abstract carries a Canadian signal from the geographic lexicon.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueNew Disease Reports · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsnot available
Fundersnot available
KeywordsConidiumBiologyBotanyApex (geometry)

Abstract

fetched live from OpenAlex

Tulips are an important commercial plant as both cut flowers and garden plants. During 2013, several tulip plants were observed in Surrey U.K. with scarring of the leaf tissue resulting in growth distortion and curving/curling of the leaves (Fig. 1). Scarred areas were usually at the leaf edges and growth caused cracking. Infected areas subsequently developed into necrotic patches. Conidiophores with Cylindrocarpon-like conidia were produced on the leaves following incubation. Conidiophores were simple, arising laterally or terminally, solitary produced and unbranched. Both macroconidia and microconidia were observed. Macroconidia were 1-3 septate (predominantly 1 septate, more than 80%), straight, cylindrical, narrowing towards the tip. The 1-septate macroconidia measured 16.6-28.1 times 2.6-3.8 üm (22.4 times 3.3 üm) with a length/width ratio of 5.1-8.5 (6.8); the 2-septate macroconidia measured 25.3-28.4 times 3.1-3.6 üm (26.8 times 3.5 üm) with a length/width ratio of 7.1-8.8 (7.7); and the 3-septate macroconidia measured 27.0-30.1 times 3.5-4.2 um (28.7 times 3.6 üm) with a length/width ratio of 7.0-8.7 (7.9) (Fig. 2). Microconidia were predominantly aseptate (occasionally 1-septate), ellipsoidal to subcylindrical, straight, measuring 6.7-17.5 times 1.9-3.4 üm (11.1 times 2.6 üm) with a length/width ratio of 3.1-5.5 (4.2) (Fig. 2). Smooth, thick-walled chlamydospores, abundantly present in infected plant tissue, were globose to cylindrical, measuring 11-14 times 9-12 üm, terminal on lateral branches, singularly or in chains or clumps, and pale brown colour (Fig. 3). A single conidial culture was isolated and the ITS and β-tubulin regions were sequenced (GenBank Accession Nos. KJ475469 and KJ513266, respectively) according to Cabral et al. (1). Both sequences matched 100% with Ilyonectria crassa (JF735275.1 and JF735394.1, respectively). Morphological characteristics also matched those for I. crassa (Cabral et al., 1), except the width of the macroconidia and microconidia were slightly narrower, leading to the 1- and 2-septate macroconidia having greater length/width ratios. Cabral et al. (1) also analysed a strain that clustered with I. crassa for most genes, but did not include it in this species because of its differing length/width ratio. For this reason, we identified our isolate as Ilyonectria sp. until further taxonomic clarifications can be made. To demonstrate pathogenicity, a conidial suspension (9.0 times105 conidia/ml) in sterile water was prepared by scraping the surface of a culture grown on potato dextrose agar for 21 days and then sprayed onto Tulipa humilis ‘Little Beauty’ foliage until run-off. Inoculated and non-inoculated (sterile water only) plants were bagged to increase humidity and kept at 20-25°C, excluding light for 24 hours, then subsequently exposed to natural daylight. After 10 days, scarring was observed on the inoculated plants only and successful re-isolation of the fungus was confirmed by morphology. The inoculated plants were examined and the outer scales of the bulbs were found to have many chlamydospores present within the tissue. Currently, I. crassa (basionym Cylindrocarpon radicicola var. crassum) is recorded only as a root rot pathogen on Lilium sp. and Narcissus sp. from the Netherlands and Panax quinquefolium from Canada (Farr & Rossman, 2). This is the first record of an Ilyonectria species causing foliar symptoms and the first case recorded on Tulipa.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.404
Threshold uncertainty score0.707

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.221
Teacher spread0.215 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it