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Controlling the false discovery rate and increasing statistical power in ecological studies

2006· article· en· W2157983306 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueEcoscience · 2006
Typearticle
Languageen
FieldArts and Humanities
TopicPhilosophy and History of Science
Canadian institutionsnot available
FundersUniversity of Michigan
KeywordsFalse discovery rateBonferroni correctionMultiple comparisons problemNull hypothesisHarmStatistical powerComputer scienceEconometricsNull (SQL)StatisticsMathematicsData miningPsychologyBiologySocial psychology

Abstract

fetched live from OpenAlex

Ecologists routinely use Bonferroni-based methods to control the alpha inflation associated with multiple hypothesis testing, despite the aggravating loss of power incurred. Some critics call for abandonment of this approach of controlling the familywise error rate (FWER), contending that too many unwary researchers have adopted it in the name of scientific rigour even though it often does more harm than good. We do not recommend rejecting multiplicity correction altogether. Instead, we recommend using an alternative approach. In particular, we advocate the Benjamini–Hochberg and related methods for controlling the false discovery rate (FDR). Unlike the FWER approach, which safeguards against falsely rejecting even a single null hypothesis, the FDR approach controls the rate at which null hypotheses are falsely rejected (i.e., false discoveries are made). The FDR approach represents a compromise between outright refusal to control for multiplicity, which maximizes alpha inflation, and strict adherence to FWER control, which minimizes power. We review the multiplicity problem, illustrate the advantage of the FDR approach, and promote this approach for widespread adoption in ecology.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.349
Threshold uncertainty score0.825

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.002
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.043
GPT teacher head0.252
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it