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Record W2162688024 · doi:10.1109/titb.2006.889693

Knowledge-Based Data Analysis: First Step Toward the Creation of Clinical Prediction Rules Using a New Typicality Measure

2007· article· en· W2162688024 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueIEEE Transactions on Information Technology in Biomedicine · 2007
Typearticle
Languageen
FieldComputer Science
TopicTime Series Analysis and Forecasting
Canadian institutionsSimon Fraser UniversityUniversity of British ColumbiaThompson Rivers University
Fundersnot available
KeywordsComputer scienceData miningOutlierPreprocessorMachine learningMeasure (data warehouse)Artificial intelligenceMedical diagnosisFuzzy logicData pre-processingProcess (computing)

Abstract

fetched live from OpenAlex

Clinical prediction rules play an important role in medical practice. They expedite diagnosis and limit unnecessary tests. However, the rule creation process is time consuming and expensive. With the current developments of efficient data mining algorithms and growing accessibility to medical data, the creation of clinical rules can be supported by automated rule induction from data. A data-driven method based on the reuse of previously collected medical records and clinical trial statistics is cost-effective; however, it requires well defined and intelligent methods for data analysis. This paper presents a new framework for knowledge representation for secondary data analysis and for generation of a new typicality measure, which integrates medical knowledge into statistical analysis. The framework is based on a semiotic approach for contextual knowledge and fuzzy logic for approximate knowledge. This semio-fuzzy framework has been applied to the analysis of predictors for the diagnosis of obstructive sleep apnea. This approach was tested on two clinical data sets. Medical knowledge was represented by a set of facts and fuzzy rules, and used to perform statistical analysis. Statistical methods provided several candidate outliers. Our new typicality measure identified those, which were medically significant, in the sense that the removal of those important outliers improved the descriptive model. This is a critical preprocessing step towards automated induction of predictive rules from data. These experimental results demonstrate that knowledge-based methods integrated with statistical approaches provide a practical framework to support the generation of clinical prediction rules.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.963
Threshold uncertainty score0.387

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.005
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.073
GPT teacher head0.341
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it