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Identification of Larvae of Exotic <I>Tipula paludosa</I> (Diptera: Tipulidae) and <I>T. oleracea</I> in North America Using Mitochondrial <I>cytB</I> Sequences

2006· article· en· W2177420006 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

aboutThe title or abstract carries a Canadian signal from the geographic lexicon.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueAnnals of the Entomological Society of America · 2006
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicDiptera species taxonomy and behavior
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyBotanyEcologyLarvaPhylogenetic treePEST analysisZoologyIntroduced speciesGeneGenetics

Abstract

fetched live from OpenAlex

Two exotic crane fly species, Tipula (Tipula) paludosa Meigen (Diptera: Tipulidae) and Tipula (Tipula) oleracea L. have spread considerably in North America beyond original areas of detection in eastern and western Canada. These species are endemic in Europe, and pests in pastures and cereals. The two species differ in life cycles and periods when they feed, warranting species-specific control. Identification presents a challenge because the larvae are not easily distinguishable from each other, and resemble native nonpestiferous species present in sympatry. We collected crane flies from urban landscapes and agricultural fields in Oregon in the western United States. Using polymerase chain reaction (PCR), we sequenced a portion of the mitochondrial cytB gene in 55 individuals (eight adults and 47 larvae) from 29 sites. We observed 7% divergence between exotic and native species. Phylogenetic analysis, using Nephrotoma ferruginea F. as an outgroup, resolved four well-supported monophyletic groups: the exotics, T. (Tipula) oleracea and T. (Tipula) paludosa, and two natives, Tipula (Serratipula) tristis Doane and Tipula (Triplicitipula) sp. Nucleotide divergence between T. oleracea and T. paludosa was P = 0.071, whereas within species divergence was very low (P = 0.0018 and P = 0.0022, respectively). The study indicated that mitochondrial cytB sequences provided an accurate, rapid, and economic technique for separation of T. oleracea and T. paludosa from each other and from native species, and insights on their habitats. The technique will facilitate early pest management decisions, and studies on host plants and geographic distribution, as the two exotic species extend their ranges across North America.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Science and technology studies
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.893
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0000.002
Science and technology studies0.0010.003
Scholarly communication0.0000.001
Open science0.0020.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.254
Teacher spread0.214 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it