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Record W2279775898

Seasonal and spatial variation in carbohydrate content, gene transcription and protein content for key enzymes of carbohydrate metabolism in poplar xylem

2011· dissertation· en· W2279775898 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

aboutThe title or abstract carries a Canadian signal from the geographic lexicon.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueThinkTech (Texas Tech University) · 2011
Typedissertation
Languageen
FieldAgricultural and Biological Sciences
TopicBioenergy crop production and management
Canadian institutionsnot available
Fundersnot available
KeywordsXylemStarchSucrose synthaseCarbohydrateSucroseBiologyCarbohydrate metabolismAmylaseCambiumBotanyEnzymeBiochemistryInvertase
DOInot available

Abstract

fetched live from OpenAlex

The goal of this study was to determine seasonal and spatial correlation between the carbohydrate levels and gene transcripts of key enzymes involved in carbohydrate metabolism in Populus deltoides xylem and twigs and Populus balsamifera twigs. The seasonal and spatial patterns in the carbohydrate variation was found to be consistent with the need to regulate starch storage so that it does not compete with xylem growth and yet can serve as a reserve for bud growth in the spring in both the species. In the twigs of balsam poplar, a decline in starch during spring was observed to be associated with a lower transcript level for a key enzyme in starch synthesis than when starch levels were high. Low sucrose content was preceded by a low transcript level for a key sucrose synthesis enzyme. Transcripts for sucrose synthase that degrades sucrose for growth processes of the vascular cambium were highest during the summer. However, the transcript level for β-amylase, an enzyme of starch degradation, was not always consistent with starch content. The growth and correlations observed with balsam poplar did not show good synchronization with the environment of Lubbock which could be due to a high degree of variation in the environment relative to its native region, Canada. The growth rings of P.deltoides showed high starch levels in the innermost ring and the starch levels decreased towards the outermost ring. Transcripts for the enzymes showed a positive correlation with that of carbohydrate levels. Since the storage of carbohydrate competes with the developing xylem of the stem via the activity of the vascular cambium during the growing season, regulation was expected. Accordingly, the correlations between the carbohydrates, gene transcripts and protein content of the enzymes were stumpy. Whether the transcript levels of these enzymes are being affected by the regulation of small interfering RNAs was studied by other researchers and it was found that certain miRNAs were discovered to target SPS and SuSy gene transcripts. The eastern cottonwood which originally belonged to north Indiana did grow along well with the environmental changes in Lubbock.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.416
Threshold uncertainty score0.991

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.187
Teacher spread0.159 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it