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Record W2313159296 · doi:10.1137/15m1028297

Oscillatory Dynamics for a Coupled Membrane-Bulk Diffusion Model with Fitzhugh--Nagumo Membrane Kinetics

2016· article· en· W2313159296 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueSIAM Journal on Applied Mathematics · 2016
Typearticle
Languageen
FieldComputer Science
TopicNonlinear Dynamics and Pattern Formation
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsDynamics (music)KineticsDiffusionMembraneStatistical physicsMechanicsPhysicsClassical mechanicsChemistryThermodynamics

Abstract

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Oscillatory dynamics associated with the coupled membrane-bulk PDE-ODE model of Gomez-Marin, Garcia-Ojalvon, and Sancho [Phys. Rev. Lett., 98 (2007), 168303] in one spatial dimension is analyzed using a combination of asymptotic analysis, linear stability theory, and numerical bifurcation software. The mathematical model consists of two dynamically active membranes with Fitzhugh--Nagumo kinetics, separated spatially by a distance $L$, that are coupled together through a diffusion field that occupies the bulk region $0<x<L$. The flux of the diffusion field on the membranes at $x=0$ and $x=L$ provides feedback to the local dynamics on the membranes. In the absence of membrane-bulk coupling the membrane kinetics have a stable fixed point. The effect of bulk diffusion is to trigger either synchronous and asynchronous oscillations in the two membranes. In the singular limit of slow-fast membrane dynamics, and with only one diffusing species in the bulk, phase diagrams in parameter space showing where either synchronous or asynchronous oscillations occur, together with the corresponding Hopf frequencies at onset, are provided analytically. When the membrane kinetics is not of slow-fast type, a numerical study of the stability problem together with the numerical bifurcation software XPPAUT [G. B. Ermentrout, Simulating, Analyzing, and Animating Dynamical Systems: A Guide to XPPAUT for Researchers and Students, SIAM, Philadelphia, 2002] is used to to construct global bifurcation diagrams of steady-states and the bifurcating periodic solution branches for the case of either one or two diffusing species in the bulk. Overall, our results show the existence of a wide parameter range where stable synchronous oscillatory dynamics in the two membranes can occur. Predictions from the analytical and bifurcation theory are confirmed with full numerical simulations of the PDE-ODE system.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.931
Threshold uncertainty score0.802

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.224
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it