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Record W2497195323 · doi:10.1007/978-1-59745-542-8

Protein Blotting and Detection

2009· book· en· W2497195323 on OpenAlexfundno aff
Biji T. Kurien, R. Hal Scofield

Bibliographic record

VenueMethods in molecular biology · 2009
Typebook
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetics, Bioinformatics, and Biomedical Research
Canadian institutionsnot available
FundersUniversity of Oklahoma Health Sciences CenterUniversitat Autònoma de BarcelonaOtsuka PharmaceuticalNational Taiwan UniversityBen-Gurion University of the NegevUniversité de ToulouseUniversity of CreteOklahoma Medical Research FoundationYork UniversityNational Cancer InstituteBrigham and Women's HospitalUniversità Degli Studi di Modena e Reggio EmilaHebrew University of JerusalemThomas Jefferson UniversitySchool of Medicine, New York UniversityTechnische Universität DresdenAgence Française de Lutte contre le DopageUniversity of OklahomaOffice of International Science and EngineeringUniversity of Wisconsin-MadisonUniversity of ConnecticutU.S. Department of Veterans Affairs
KeywordsBlotBiologyBiochemistryGene

Abstract

fetched live from OpenAlex

Amazingly for a procedure so fundamental to present-day biomedical research as well as medical diagnostics, development of the western blot occurred within the memory of many individuals who continue to work in these fields. That is, conversely, there are many investigators and clinicians presently working who recall the days prior to the western blot. The personal stories of how and why the technique was developed are given in this volume by the people intimately involved with this development. These stories date from only roughly 30 years ago. Since then, a very large number of variations on the theme of gel separation of biologic products by different parameters such as size or charge, followed by transfer to solid support and identification, have been developed. The present compilation brings together a large number of these techniques, some of which are adaptations of the original technique in order to solve a problem, whereas others are far flung and vastly different from how the original techniques were envisioned. The goal of our work is to not only compile the vast array of techniques based on western blot, but also give practical methods. We suspect that almost everyone involved in the enterprise has tried to bring a new technique to their laboratory by reproducing methods found in traditional publications. Doing this is commonly fraught with difficulty and may take weeks to accomplish, or may be abandoned as impossible. We hope that investigators will be able to open this volume and rapidly begin to use a technique new to them and their laboratories because the chapters give detailed practical methods, tips, and alternatives. If you are able to open a chapter, and conveniently and quickly perform a new procedure in your laboratory, then we will have accomplished our goals in editing this work.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.010
metaresearch head score (Gemma)0.009
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.064
Threshold uncertainty score0.213

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0100.009
Meta-epidemiology (narrow)0.0080.005
Meta-epidemiology (broad)0.0070.005
Bibliometrics0.0130.010
Science and technology studies0.0050.007
Scholarly communication0.0060.008
Open science0.0090.008
Research integrity0.0050.015
Insufficient payload (model declined to judge)0.0640.114

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.372
Teacher spread0.351 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations27
Published2009
Admission routes1
Has abstractyes

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