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Record W2512875827 · doi:10.18637/jss.v072.i05

<b>RSKC</b>: An<i>R</i>Package for a Robust and Sparse K-Means Clustering Algorithm

2016· article· en· W2512875827 on OpenAlexaff
Yumi Kondo, Matías Salibián‐Barrera, Ruben H. Zamar

Bibliographic record

VenueJournal of Statistical Software · 2016
Typearticle
Languageen
FieldComputer Science
TopicAdvanced Clustering Algorithms Research
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsOutlierCluster analysisComputer scienceData miningR packageIdentification (biology)AlgorithmMonte Carlo methodArtificial intelligenceMathematicsStatistics

Abstract

fetched live from OpenAlex

Witten and Tibshirani (2010) proposed an algorithim to simultaneously find clusters and select clustering variables, called sparse K-means (SK-means). SK-means is particularly useful when the dataset has a large fraction of noise variables (that is, variables without useful information to separate the clusters). SK-means works very well on clean and complete data but cannot handle outliers nor missing data. To remedy these problems we introduce a new robust and sparse K-means clustering algorithm implemented in the R package RSKC. We demonstrate the use of our package on four datasets. We also conduct a Monte Carlo study to compare the performances of RSK-means and SK-means regarding the selection of important variables and identification of clusters. Our simulation study shows that RSK-means performs well on clean data and better than SK-means and other competitors on outlier-contaminated data.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.030
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Software · Consensus signal: none
Teacher disagreement score0.102
Threshold uncertainty score0.341

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.030
Meta-epidemiology (narrow)0.0040.003
Meta-epidemiology (broad)0.0030.003
Bibliometrics0.0040.004
Science and technology studies0.0010.001
Scholarly communication0.0030.003
Open science0.0050.004
Research integrity0.0020.005
Insufficient payload (model declined to judge)0.1020.094

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.308
Teacher spread0.275 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations58
Published2016
Admission routes1
Has abstractyes

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