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Record W2561332529 · doi:10.3354/ame01813

Versatile photophysiology of compositionally similar cyanobacterial mat communities inhabiting submerged sinkholes of Lake Huron

2016· article· en· W2561332529 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

fundA Canadian funder is recorded on the work.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueAquatic Microbial Ecology · 2016
Typearticle
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsnot available
FundersNational Oceanic and Atmospheric AdministrationGrand Valley State UniversityNational Aeronautics and Space AdministrationMichigan Space Grant ConsortiumUniversity of WaterlooNational Science Foundation
KeywordsSinkholeMicrobial matChlorophyll aEcologyAquatic ecosystemBiologyEnvironmental scienceOceanographyCyanobacteriaBotanyKarstGeology

Abstract

fetched live from OpenAlex

Recently discovered submerged sinkholes in Lake Huron are high-sulfur, lowoxygen extreme environments for microbial life. In order to understand the relationship between the physical environment, photophysiology and community composition, we measured the physical conditions, photophysiological indices, and genetic diversity at 3 microbial mat sites bathed in high conductivity groundwater under a natural light gradient during 2012 and 2013. A strong seasonal trend prevailed at all sites, characterized by decreased photosynthetic yield (F v '/F m '; 0.25 to 0.40) during the summer (April to August) and increased yield (0.70 to 0.75) during the winter (November to March). Chlorophyll a content varied seasonally in a similar manner to photosynthetic yield. All sites were dominated by > 80% abundance of one cyanobacterial group, most closely related to Phormidium sp. Phycobilins (phycocyanin and phycoerythrin) were consistently higher in concentration than chlorophyll. Photosynthetic yield was statistically indistinguishable between sites, suggesting that these mat communities are able to acclimate across a wide range of photosynthetically active radiation (PAR). Interestingly, these cyanobacteria carried out oxygenic photosynthesis in the presence of in vitro H 2 S, further suggestive of their versatile photophysiologies under variable redox conditions. Collectively, our study provides insight into the adaptive capabilities of cyanobacteria by revealing how they photophysiologically respond to changes in light climate and redox conditions, and are thereby able to inhabit a wide range of physico-chemical environments. Such versatile physiologies may have enabled their ancestors to thrive across a range of habitats on early Earth.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesScience and technology studies, Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.454
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.003
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0250.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.201
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it