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Record W2613478894 · doi:10.1101/126821

Simultaneous Modelling of Movement, Measurement Error, and Observer Dependence in Double-Observer Distance Sampling Surveys

2017· preprint· en· W2613478894 on OpenAlexaff
By Paul B. Conn, Ray T. Alisauskas

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2017
Typepreprint
Languageen
FieldMathematics
TopicCensus and Population Estimation
Canadian institutionsEnvironment and Climate Change Canada
Fundersnot available
KeywordsEstimatorObserver (physics)StatisticsDistance samplingObservational errorSampling (signal processing)Abundance estimationMathematicsComputer scienceTransectAbundance (ecology)Computer visionEcologyBiologyPhysics

Abstract

fetched live from OpenAlex

Mark-recapture distance sampling uses detections, non-detections and recorded distances of animals encountered in transect surveys to estimate abundance. However, commonly available distance sampling estimators require that distances to target animals are made without error and that animals are stationary while sampling is being conducted. In practice these requirements are often violated. In this paper, we describe a marginal likelihood framework for estimating abundance from double-observer data that can accommodate movement and measurement error when observations are made consecutively (as with front and rear observers) and when animals are randomly distributed when detected by the first observer. Our framework requires that two observers independently detect and record binned distances to observed animal groups, as we well as a binary indicator for whether animals were moving or not. We then assume that stationary animals are subject to measurement error whereas moving animals are subject to both movement and measurement error. Integrating over unknown animal locations, we construct a marginal likelihood for detection, movement, and measurement error parameters. Estimates of animal abundance are then obtained using a modified Horvitz-Thompson-like estimator. In addition, unmodelled heterogeneity in detection probability can be accommodated through observer dependence parameters. Using simulation, we show that our approach yields low bias compared to approaches that ignore movement and/or measurement error, including in cases where there is considerable detection heterogeneity. We demonstrate our approach using data from a double-observer waterfowl helicopter survey.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.008
metaresearch head score (Gemma)0.027
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.008
Threshold uncertainty score0.041

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0080.027
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.002
Open science0.0020.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.176
GPT teacher head0.310
Teacher spread0.134 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2017
Admission routes1
Has abstractyes

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