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Record W2890289581 · doi:10.1093/biostatistics/kxy041

Pointless spatial modeling

2018· article· en· W2890289581 on OpenAlexfundno aff
Katie Wilson, Jon Wakefield

Bibliographic record

VenueBiostatistics · 2018
Typearticle
Languageen
FieldEconomics, Econometrics and Finance
TopicSpatial and Panel Data Analysis
Canadian institutionsnot available
FundersNational Cancer InstituteMedical Research CouncilNational Institutes of HealthApplied Molecular Biosciences UnitKurdistan University Of Medical SciencesMekelle UniversityĐại học Quốc gia Hà NộiUniversity of PeradeniyaAddis Ababa UniversityUniversity of GondarUniversity of TabrizUniversidade Federal de SergipeUniversitatea de Medicină şi Farmacie "Carol Davila" BucureştiUniversidade do PortoBahir Dar UniversityAlexandria UniversityBill and Melinda Gates FoundationKarolinska InstitutetTabriz University of Medical SciencesShahroud University of Medical SciencesBabol University of Medical SciencesTehran University of Medical Sciences and Health ServicesMazandaran University of Medical SciencesUniversität BielefeldAksum UniversityPublic Health Foundation of IndiaKaiser PermanenteAustralian Catholic UniversityMansoura UniversityHamadan University of Medical SciencesUniversity of OxfordUniversidad Autónoma de SinaloaMaragheh University of Medical SciencesUniversidad Nacional Autónoma de MéxicoIndian Institute of Technology DelhiIstituto di Ricerche Farmacologiche Mario Negri - IRCCSUniversity of SouthamptonUniversity of WashingtonA.T. Still UniversitySimon Fraser UniversityUniversity of OttawaU.S. Department of Veterans Affairs
KeywordsComputer scienceLaplace's methodBayesian inferenceSmoothingRandom fieldMarkov random fieldBayesian probabilityVariable-order Bayesian networkAlgorithmTheoretical computer scienceApplied mathematicsMathematicsArtificial intelligenceStatistics

Abstract

fetched live from OpenAlex

The analysis of area-level aggregated summary data is common in many disciplines including epidemiology and the social sciences. Typically, Markov random field spatial models have been employed to acknowledge spatial dependence and allow data-driven smoothing. In the context of an irregular set of areas, these models always have an ad hoc element with respect to the definition of a neighborhood scheme. In this article, we exploit recent theoretical and computational advances to carry out modeling at the continuous spatial level, which induces a spatial model for the discrete areas. This approach also allows reconstruction of the continuous underlying surface, but the interpretation of such surfaces is delicate since it depends on the quality, extent and configuration of the observed data. We focus on models based on stochastic partial differential equations. We also consider the interesting case in which the aggregate data are supplemented with point data. We carry out Bayesian inference and, in the language of generalized linear mixed models, if the link is linear, an efficient implementation of the model is available via integrated nested Laplace approximations. For nonlinear links, we present two approaches: a fully Bayesian implementation using a Hamiltonian Monte Carlo algorithm and an empirical Bayes implementation, that is much faster and is based on Laplace approximations. We examine the properties of the approach using simulation, and then apply the model to the classic Scottish lip cancer data.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.011
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.013
Threshold uncertainty score0.038

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.011
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0030.004
Science and technology studies0.0010.002
Scholarly communication0.0030.005
Open science0.0050.003
Research integrity0.0030.002
Insufficient payload (model declined to judge)0.0110.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.060
GPT teacher head0.238
Teacher spread0.178 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations36
Published2018
Admission routes1
Has abstractyes

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