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Record W2904886331 · doi:10.3389/fninf.2018.00102

An Empirical Comparison of Meta- and Mega-Analysis With Data From the ENIGMA Obsessive-Compulsive Disorder Working Group

2019· article· en· W2904886331 on OpenAlexaff
Premika S.W. Boedhoe, Martijn W. Heymans, Lianne Schmaal, Yoshinari Abe, Pino Alonso, Stephanie H. Ameis, Alan Anticevic, Paul Arnold, Marcelo C. Batistuzzo, Francesco Benedetti, Jan C. Beucke, Irene Bollettini, Anushree Bose, Silvia Brem, Anna Calvo, Rosa Calvo, Yuqi Cheng, Kang Ik K. Cho, Valentina Ciullo, Sara Dallaspezia, Damiaan Denys, Jamie D. Feusner, Kate D. Fitzgerald, Jean‐Paul Fouché, Egill A. Friðgeirsson, Patricia Gruner, Gregory L. Hanna, Derrek P. Hibar, Marcelo Q. Hoexter, Hao Hu, Chaim Huyser, Neda Jahanshad, Anthony James, Norbert Kathmann, Christian Kaufmann, Kathrin Koch, Jun Soo Kwon, Luisa Lázaro, Christine Löchner, Rachel Marsh, Ignacio Martínez‐Zalacaín, David Mataix‐Cols, José M. Menchón, Luciano Minuzzi, Ástrid Morer, Takashi Nakamae, Tomohiro Nakao, Janardhanan C. Narayanaswamy, Seiji Nishida, Erika L. Nurmi, Joseph O’Neill, John Piacentini, Fabrizio Piras, Federica Piras, Y. C. Janardhan Reddy, Tim Jonas Reeß, Yuki Sakai, João Ricardo Sato, H. Blair Simpson, Noam Soreni, Carles Soriano‐Mas, Gianfranco Spalletta, Michael C. Stevens, Philip R. Szeszko, David F. Tolin, Guido van Wingen, Ganesan Venkatasubramanian, Susanne Walitza, Zhen Wang, Je‐Yeon Yun, Paul M. Thompson, Dan J. Stein, Odile A. van den Heuvel, Jos W. R. Twisk

Bibliographic record

VenueFrontiers in Neuroinformatics · 2019
Typearticle
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsUniversity of CalgaryUniversity of TorontoSt Joseph's Health CareSt. Joseph’s Healthcare HamiltonHospital for Sick ChildrenCentre for Addiction and Mental Health
FundersClinical and Translational Science Institute, University of California, Los AngelesEuropean Regional Development FundJapan Society for the Promotion of ScienceH. Lundbeck A/SNational Institute of Mental HealthMinistero della SaluteMinistry of Education, Culture, Sports, Science and TechnologyThe Wellcome Trust DBT India AllianceDeutsche ForschungsgemeinschaftInstituto de Salud Carlos IIIZonMwDepartment of Science and Technology, Ministry of Science and Technology, IndiaNational Center for Advancing Translational SciencesNederlandse Organisatie voor Wetenschappelijk OnderzoekWellcome TrustNational Alliance for Research on Schizophrenia and DepressionInternational OCD FoundationNational Institutes of HealthSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungDepartment of Biotechnology, Ministry of Science and Technology, IndiaAgència de Gestió d'Ajuts Universitaris i de RecercaNational Science Foundation
KeywordsMeta-analysisRandom effects modelPoolingLinear modelMega-Linear regressionStatisticsConfidence intervalGeneralized linear mixed modelMeta-regressionEconometricsRegression analysisSubgroup analysisComputer scienceMathematicsMedicineArtificial intelligence

Abstract

fetched live from OpenAlex

Objective: Brain imaging communities focusing on different diseases increasingly start collaborating and pooling data to perform well-powered meta- and mega-analyses. Some methodologists claim that a one-stage individual-participant data mega-analysis can be superior to a two-stage aggregated data meta-analysis, since more detailed computations can be performed in a mega-analysis. Before definitive conclusions regarding the performance of either method can be drawn, it is necessary to critically evaluate the methodology of, and results obtained by, meta- and mega-analyses. Methods: Here, we compare the inverse variance weighted random-effect meta-analysis model with a multiple linear regression mega-analysis model, but also with a linear mixed–effects random-intercept mega-analysis model, using data from 38 cohorts including 3665 participants of the ENIGMA-OCD consortium. We assessed the effect sizes and standard errors, and the fit of the models to evaluate the performance of the different methods. Results: The mega-analytical models showed lower standard errors and narrower confidence intervals than the meta-analysis. Similar standard errors and confidence intervals were found for the linear regression and linear mixed-effects random-intercept models. Moreover, the linear mixed-effects random-intercept models showed better fit indices compared to linear regression mega-analytical models. Conclusions: Our findings indicate that results obtained by meta- and mega-analysis differ, in favor of the latter. In multi-center studies with a moderate amount of variation between cohorts, a linear mixed-effects random-intercept mega-analytical framework appears to be the best approach to investigate structural neuroimaging data.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.363
metaresearch head score (Gemma)0.634
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.637
Threshold uncertainty score0.786

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.3630.634
Meta-epidemiology (narrow)0.0040.003
Meta-epidemiology (broad)0.0110.040
Bibliometrics0.0150.020
Science and technology studies0.0010.003
Scholarly communication0.0070.006
Open science0.0060.005
Research integrity0.0040.004
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.104
GPT teacher head0.325
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designSimulation or modeling
DomainMethods
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations118
Published2019
Admission routes1
Has abstractyes

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