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Record W2912814480 · doi:10.1002/cjp2.127

The use of digital pathology and image analysis in clinical trials

2019· article· en· W2912814480 on OpenAlexfundno aff
Robert Pell, Karin A. Oien, Max Robinson, Helen Pitman, Nasir Rajpoot, Jens Rittscher, David Snead, Clare Verrill

Bibliographic record

VenueThe Journal of Pathology Clinical Research · 2019
Typearticle
Languageen
FieldComputer Science
TopicAI in cancer detection
Canadian institutionsnot available
FundersBarts and The London School of Medicine and DentistryMedical Research CouncilNewcastle upon Tyne Hospitals NHS Foundation TrustQueen's UniversityCancer Research UKQueen's University BelfastUniversity of OxfordUniversity of SouthamptonNewcastle UniversityNational Cancer Research InstituteBristol-Myers SquibbUK Research and InnovationUniversity of LeedsNational Institute for Health and Care Research
KeywordsDigital pathologyDigital image analysisComputer scienceMedical physicsClinical trialData scienceKey (lock)Digital imagePathologyMedicineArtificial intelligenceImage processingImage (mathematics)Computer vision

Abstract

fetched live from OpenAlex

Digital pathology and image analysis potentially provide greater accuracy, reproducibility and standardisation of pathology-based trial entry criteria and endpoints, alongside extracting new insights from both existing and novel features. Image analysis has great potential to identify, extract and quantify features in greater detail in comparison to pathologist assessment, which may produce improved prediction models or perform tasks beyond manual capability. In this article, we provide an overview of the utility of such technologies in clinical trials and provide a discussion of the potential applications, current challenges, limitations and remaining unanswered questions that require addressing prior to routine adoption in such studies. We reiterate the value of central review of pathology in clinical trials, and discuss inherent logistical, cost and performance advantages of using a digital approach. The current and emerging regulatory landscape is outlined. The role of digital platforms and remote learning to improve the training and performance of clinical trial pathologists is discussed. The impact of image analysis on quantitative tissue morphometrics in key areas such as standardisation of immunohistochemical stain interpretation, assessment of tumour cellularity prior to molecular analytical applications and the assessment of novel histological features is described. The standardisation of digital image production, establishment of criteria for digital pathology use in pre-clinical and clinical studies, establishment of performance criteria for image analysis algorithms and liaison with regulatory bodies to facilitate incorporation of image analysis applications into clinical practice are key issues to be addressed to improve digital pathology incorporation into clinical trials.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.073
metaresearch head score (Gemma)0.131
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.073
Threshold uncertainty score0.385

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0730.131
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0080.006
Science and technology studies0.0010.007
Scholarly communication0.0100.006
Open science0.0030.005
Research integrity0.0030.005
Insufficient payload (model declined to judge)0.0100.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.517
GPT teacher head0.587
Teacher spread0.069 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations105
Published2019
Admission routes1
Has abstractyes

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