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Record W2918536503 · doi:10.3389/fmicb.2019.00395

Artificial Neural Networks for Prediction of Tuberculosis Disease

2019· article· en· W2918536503 on OpenAlexaff
Muhammad Tahir Khan, Aman Chandra Kaushik, Linxiang Ji, Shaukat Iqbal Malik, Sajid Ali, Dong‐Qing Wei

Bibliographic record

VenueFrontiers in Microbiology · 2019
Typearticle
Languageen
FieldMedicine
TopicCOVID-19 diagnosis using AI
Canadian institutionsThompson Rivers University
FundersShanghai Jiao Tong UniversityHigher Education Commission, PakistanMinistry of Science and Technology of the People's Republic of ChinaNational Natural Science Foundation of China
KeywordsTuberculosisMedicineDiseaseMycobacterium tuberculosisGold standard (test)Normalization (sociology)Diagnostic testSuspectInfectious disease (medical specialty)Artificial intelligenceIntensive care medicinePediatricsInternal medicinePathologyComputer science

Abstract

fetched live from OpenAlex

Background: The global burden of tuberculosis (TB) and antibiotic resistance is attracting the attention of researchers to develop some novel and rapid diagnostic tools. Although, the conventional methods like culture are considered as the gold standard, they are time consuming and offer more time in the transmission of disease. Further, the Xpert MTB/RIF assay offers the fast diagnostic facility within two hours, but due to low the sensitivity in some sample types may lead to more serious state of the disease. The role of computer technologies is now increasing in the diagnostic procedures. Here, in the current study we have applied the artificial neutral network (ANN) that predicted the TB disease based on the TB suspect data. Methods: We developed an approach for prediction of TB, based on artificial neural network (ANN). The data was collected from the TB suspects, guardians or care takers along with sample, referred by TB units and health centers. All the samples were processed and cultured. Data was trained on 12636 records of TB patients, collected during the years, 2016 and 2017 from provincial tuberculosis reference laboratory, Khyber Pakhtunkhwa, Pakistan. The training and test set of the suspect data were kept as 70% and 30% respectively followed by validation and normalization. The ANN take the TB suspects information’s like gender, age, HIV-status, previous TB history, sample type, sign and symptoms for TB prediction. Results: Based on TB patient’s data, ANN accurately predicted the MTB positive or negative with overall accuracy of >94%. Further, the test and validation accuracies were found >93%. This increased accuracy of ANN in detection of TB suspected patients might be useful for early management of disease to adopt some control measure in further transmission and reduce the drug resistance burden. Conclusion: ANNs algorithms may play effective role in early diagnosis of TB disease that might be applied as a supportive tool. Modern computer technologies should be trained in the diagnostics for a rapid management of disease. Delays in TB diagnosis and initiation treatment may allow the emergence of new cases by transmission, causing high drug resistance in TB high burden countries.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.021

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.005
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.259
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations88
Published2019
Admission routes1
Has abstractyes

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