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Record W2945882181 · doi:10.1080/15622975.2019.1574024

Guidelines for the standardized collection of blood-based biomarkers in psychiatry: Steps for laboratory validity – a consensus of the Biomarkers Task Force from the WFSBP

2019· article· en· W2945882181 on OpenAlexafffund
Ana C. Andreazza, Isabelle Laksono, Brisa S. Fernandes, Catherine Toben, Piotr Lewczuk, Peter Riederer, Sidney H. Kennedy, Dimitrios Kapogiannis, Florence Thibaut, Manfred Gerlach, Carla Gallo, Yong‐Ku Kim, Edna Grünblatt, Lakshmi N. Yatham, Michael Berk, Bernhard T. Baune

Bibliographic record

VenueThe World Journal of Biological Psychiatry · 2019
Typearticle
Languageen
FieldHealth Professions
TopicHealthcare cost, quality, practices
Canadian institutionsUniversity of British ColumbiaUniversity Health NetworkUniversity of TorontoCentre for Addiction and Mental Health
FundersNational Institute on AgingCanadian Institutes of Health ResearchNational Institutes of HealthInnovative Medicines InitiativeNational Health and Medical Research CouncilEuropean CommissionOntario Brain InstituteEuropean Federation of Pharmaceutical Industries and AssociationsFujirebio Europe
KeywordsVenipunctureReliability (semiconductor)Informed consentDocumentationBiomarkerMedicineBiomarker discoveryExternal validityValidityIdentification (biology)Medical laboratoryPsychologyMedical physicsPsychiatryClinical psychologyPsychometricsPathologyAlternative medicineComputer science

Abstract

fetched live from OpenAlex

Recently, there has been a major shift in the field of psychiatry towards the exploration of complex relationships between blood-based biomarkers and the pathophysiology of psychiatric and neuropsychiatric disorders. However, issues with study reproducibility, validity and reliability have hindered progress towards the identification of clinically relevant biomarkers for psychiatry. The achievement of laboratory validity is a crucial first step for the posterior development of clinical validity. There is evidence that the variability observed in blood-based research studies may be minimised with the implementation of standardised pre-analytical methods and uniform clinical protocols (i.e., pre-venipuncture). It has been documented that errors made in the pre-analytical phase account for 46-68.2% of laboratory testing errors. Thus, standardising clinical assessment, ethical procedures and pre-analytical phase of clinical research is essential for the reproducibility, validity and reliability of blood marker assessment, and reducing the risk of invalid test results. Various other areas of research have already moved towards guidelines for the standardised collection of blood-based biomarkers. Here we aim to provide a set of guidelines that we believe would improve biomarker research: (1) pre-venipuncture information and documentation, (2) ethics of participant consent and (3) pre-analytical methods. Ultimately, we hope this will assist study planning and will improve data comparison across studies allowing for the discovery of biomarkers in psychiatry with both laboratorial and clinical validity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.337
metaresearch head score (Gemma)0.277
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.337
Threshold uncertainty score0.818

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.3370.277
Meta-epidemiology (narrow)0.0030.003
Meta-epidemiology (broad)0.0060.008
Bibliometrics0.0170.010
Science and technology studies0.0050.011
Scholarly communication0.0110.007
Open science0.0190.011
Research integrity0.0190.027
Insufficient payload (model declined to judge)0.0030.006

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.410
GPT teacher head0.501
Teacher spread0.090 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations33
Published2019
Admission routes2
Has abstractyes

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