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Record W2950985821 · doi:10.1371/journal.pcbi.1005752

mixOmics: An R package for ‘omics feature selection and multiple data integration

2017· article· en· W2950985821 on OpenAlexaff
Florian Rohart, Benoît Gautier, Amrit Singh, Kim‐Anh Lê Cao

Bibliographic record

VenuePLoS Computational Biology · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBioinformatics and Genomic Networks
Canadian institutionsPrevention of Organ FailureUniversity of British Columbia
FundersDiamantina Institute, University of QueenslandNational Health and Medical Research CouncilMedical Research CouncilUniversity of QueenslandAustralian Cancer Research Foundation
KeywordsUnivariateOmicsComputer scienceFeature selectionIdentification (biology)Data integrationBiological dataData miningMultivariate statisticsData typeSystems biologyDimensionality reductionComputational biologyData scienceBioinformaticsBiologyMachine learning

Abstract

fetched live from OpenAlex

OpenAlex records an abstract for this work, but it could not be fetched just now.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.025
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Software · Consensus signal: none
Teacher disagreement score0.054
Threshold uncertainty score0.179

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0060.025
Meta-epidemiology (narrow)0.0040.002
Meta-epidemiology (broad)0.0040.005
Bibliometrics0.0030.003
Science and technology studies0.0010.001
Scholarly communication0.0040.003
Open science0.0050.006
Research integrity0.0020.005
Insufficient payload (model declined to judge)0.0540.036

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.295
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3,925
Published2017
Admission routes1
Has abstractyes

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