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The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments

2016· article· en· 1,910 citations· W2951103577 on OpenAlex· 10.1038/sdata.2016.44

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A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

Canadian affiliationAn author listed a Canadian institution. This is the only route the usual frame has.

Machine scores (provisional)

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

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Opus teacher head0.375
GPT teacher head0.417
Teacher spread
0.043 · how far apart the two teachers sit on this one work
Validation status
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Abstract

The development of magnetic resonance imaging (MRI) techniques has defined modern neuroimaging. Since its inception, tens of thousands of studies using techniques such as functional MRI and diffusion weighted imaging have allowed for the non-invasive study of the brain. Despite the fact that MRI is routinely used to obtain data for neuroscience research, there has been no widely adopted standard for organizing and describing the data collected in an imaging experiment. This renders sharing and reusing data (within or between labs) difficult if not impossible and unnecessarily complicates the application of automatic pipelines and quality assurance protocols. To solve this problem, we have developed the Brain Imaging Data Structure (BIDS), a standard for organizing and describing MRI datasets. The BIDS standard uses file formats compatible with existing software, unifies the majority of practices already common in the field, and captures the metadata necessary for most common data processing operations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

The record

Venue
Scientific Data
Topic
Scientific Computing and Data Management
Field
Decision Sciences
Canadian institutions
Montreal Neurological Institute and Hospital
Funders
National Institute on Alcohol Abuse and AlcoholismEuropean Regional Development FundNational Institute of General Medical SciencesNational Institute of Mental HealthMedical Research CouncilCenter for Behavioral Brain SciencesNational Institute of Biomedical Imaging and BioengineeringWellcome TrustNational Institutes of HealthLaura and John Arnold FoundationNational Science Foundation
Keywords
Computer scienceNeuroimagingMetadataData sharingSoftwareField (mathematics)File formatFunctional magnetic resonance imagingInformation retrievalArtificial intelligenceData miningData scienceDatabaseWorld Wide WebProgramming language
Has abstract in OpenAlex
yes