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Record W2954081892 · doi:10.3389/fmars.2019.00440

Ocean FAIR Data Services

2019· article· en· W2954081892 on OpenAlexaff
Toste Tanhua, Sylvie Pouliquen, Jessica Hausman, Kevin O’Brien, Pip Bricher, T. De Bruin, Justin Buck, Eugene Burger, Thierry Carval, Kenneth S. Casey, Alessandra Giorgetti, Helen Glaves, Valérie Harscoat, Danie Kinkade, Jose H Muelbert, Antonio Novellino, Benjamin Pfeil, Peter Pulsifer, Anton Van de Putte, Erin Robinson, Dick Schaap, Alexander Smirnov, Neville Smith, Derrick Snowden, Tobias Spears, Shelley Stall, Marten Tacoma, Peter Thijsse, Stein Tronstad, Thomas Vandenberghe, Micah Wengren, Lesley Wyborn, Zhiming Zhao

Bibliographic record

VenueFrontiers in Marine Science · 2019
Typearticle
Languageen
FieldComputer Science
TopicResearch Data Management Practices
Canadian institutionsFisheries and Oceans Canada
FundersNatural Environment Research CouncilInstituto Nacional de Ciência e Tecnologia - Oceanografia Integrada e Usos Múltiplos da Plataforma Continental e Oceano Adjacente - Centro de Oceanografia IntegradaLifeWatch – Niclas Öberg FoundationExecutive Agency for Small and Medium-sized EnterprisesConselho Nacional de Desenvolvimento Científico e TecnológicoNational Oceanic and Atmospheric AdministrationSight Research UKHorizon 2020 Framework ProgrammeJoint Institute for the Study of the Atmosphere and OceanCalifornia Institute of Technology
KeywordsInteroperabilityMetadataComputer scienceWorkflowData qualityData managementStandardizationData discoveryData accessData scienceData curationWorld Wide WebDatabaseService (business)Business

Abstract

fetched live from OpenAlex

Well-founded data management systems are of vital importance for ocean observing systems as they ensure that essential data are not only collected but also retained and made accessible for analysis and application by current and future users. Effective data management requires collaboration across activities including observations, metadata and data assembly, quality assurance and control (QA/QC), and data publication that enables local and interoperable discovery and access, and secure archiving that guarantees long-term preservation. To achieve this, data should be Findable, Accessible, Interoperable, and Reusable (FAIR). Here, we outline how these principles apply to ocean data, and illustrate them with a few examples. In recent decades, ocean data managers, in close collaboration with international organizations, have played an active role in the improvement of environmental data standardization, accessibility and interoperability through different projects, enhancing access to observation data at all stages of the data life cycle and fostering the development of integrated services targeted to research, regulatory and operational users. As ocean observing systems evolve and an increasing number of autonomous platforms and sensors are deployed, the volume and variety of data increases dramatically. For instance, there are more than 70 data catalogues that contain metadata records for the polar oceans, a situation that makes comprehensive data discovery beyond the capacity of most researchers. To better serve research, operational, and commercial users, more efficient turnaround of quality data in known formats and made available through web services is necessary. In particular, automation of data workflows will be critical to reduce friction throughout the data value chain. Adhering to the FAIR principles with free, timely and unrestricted access to ocean observation data is beneficial for the originators, has obvious benefits for users and is an essential foundation for the development of new services made possible with big data technologies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.026
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Open science, Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: Reproducibility · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.994
Threshold uncertainty score0.955

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0060.026
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0070.011
Science and technology studies0.0030.002
Scholarly communication0.0120.011
Open science0.0060.014
Research integrity0.0050.003
Insufficient payload (model declined to judge)0.3310.275

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.317
Teacher spread0.281 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
DomainReproducibility
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations244
Published2019
Admission routes1
Has abstractyes

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