Data-driven inference for stationary jump-diffusion processes with application to membrane voltage fluctuations in pyramidal neurons
Bibliographic record
Abstract
The emergent activity of biological systems can often be represented as low-dimensional, Langevin-type stochastic differential equations. In certain systems, however, large and abrupt events occur and violate the assumptions of this approach. We address this situation here by providing a novel method that reconstructs a jump-diffusion stochastic process based solely on the statistics of the original data. Our method assumes that these data are stationary, that diffusive noise is additive, and that jumps are Poisson. We use threshold-crossing of the increments to detect jumps in the time series. This is followed by an iterative scheme that compensates for the presence of diffusive fluctuations that are falsely detected as jumps. Our approach is based on probabilistic calculations associated with these fluctuations and on the use of the Fokker-Planck and the differential Chapman-Kolmogorov equations. After some validation cases, we apply this method to recordings of membrane noise in pyramidal neurons of the electrosensory lateral line lobe of weakly electric fish. These recordings display large, jump-like depolarization events that occur at random times, the biophysics of which is unknown. We find that some pyramidal cells increase their jump rate and noise intensity as the membrane potential approaches spike threshold, while their drift function and jump amplitude distribution remain unchanged. As our method is fully data-driven, it provides a valuable means to further investigate the functional role of these jump-like events without relying on unconstrained biophysical models.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.007 | 0.028 |
| Meta-epidemiology (narrow) | 0.001 | 0.001 |
| Meta-epidemiology (broad) | 0.002 | 0.001 |
| Bibliometrics | 0.002 | 0.001 |
| Science and technology studies | 0.001 | 0.002 |
| Scholarly communication | 0.001 | 0.002 |
| Open science | 0.002 | 0.002 |
| Research integrity | 0.001 | 0.002 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".