MétaCan
Menu
Back to cohort
Record W3013921428 · doi:10.1186/s12874-020-0900-z

Methods of competing risks flexible parametric modeling for estimation of the risk of the first disease among HIV infected men

2020· article· en· W3013921428 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueBMC Medical Research Methodology · 2020
Typearticle
Languageen
FieldMathematics
TopicStatistical Methods and Bayesian Inference
Canadian institutionsMcMaster UniversityImpact
FundersNational Institute of Allergy and Infectious DiseasesNational Cancer InstituteNational Institute on Deafness and Other Communication DisordersNational Institute on Drug AbuseNorthwestern UniversityNational Institute of Mental HealthNational Heart, Lung, and Blood InstituteNational Center for Advancing Translational SciencesJohns Hopkins Bloomberg School of Public HealthUniversity of California, Los AngelesNational Institutes of HealthJohns Hopkins UniversityTehran University of Medical Sciences and Health ServicesUniversity of PittsburghMcMaster University
KeywordsEstimationHuman immunodeficiency virus (HIV)DiseaseParametric statisticsMedicineEnvironmental healthEconometricsComputer scienceStatisticsRisk analysis (engineering)Family medicineMathematicsInternal medicineEngineering

Abstract

fetched live from OpenAlex

Abstract Background Patients infected with the Human Immunodeficiency Virus (HIV) are susceptible to many diseases. In these patients, the occurrence of one disease alters the chance of contracting another. Under such circumstances, methods for competing risks are required. Recently, competing risks analyses in the scope of flexible parametric models have risen to address this requirement. These lesser-known analyses have considerable advantages over conventional methods. Methods Using data from Multi Centre AIDS Cohort Study (MACS), this paper reviews and applies methods of competing risks flexible parametric models to analyze the risk of the first disease (AIDS or non-AIDS) among HIV-infected patients. We compared two alternative subdistribution hazard flexible parametric models (SDH FPM 1 and SDH FPM 2) with the Fine & Gray model. To make a complete inference, we performed cause-specific hazard flexible parametric models for each event separately as well. Results Both SDH FPM 1 and SDH FPM 2 provided consistent results regarding the magnitude of coefficients and risk estimations compared with estimations obtained from the Fine & Gray model, However, competing risks flexible parametric models provided more efficient and smoother estimations for the baseline risks of the first disease. We found that age at HIV diagnosis indirectly affected the risk of AIDS as the first event by increasing the number of patients who experience a non-AIDS disease prior to AIDS among > 40 years. Other significant covariates had direct effects on the risks of AIDS and non-AIDS. Discussion The choice of an appropriate model depends on the research goals and computational challenges. The SDH FPM 1 models each event separately and requires calculating censoring weights which is time-consuming. In contrast, SDH FPM 2 models all events simultaneously and is more appropriate for large datasets, however, when the focus is on one particular event SDH FPM 1 is more preferable.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.039
metaresearch head score (Gemma)0.767
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.728
Threshold uncertainty score0.990

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0390.767
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.002
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.649
GPT teacher head0.595
Teacher spread0.054 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it