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Record W3047934553 · doi:10.1371/journal.pone.0230888

Site-specific machine learning predictive fertilization models for potato crops in Eastern Canada

2020· article· en· W3047934553 on OpenAlexaffabout
Zonlehoua Coulibali, Athyna N. Cambouris, Sérge-Étienne Parent

Bibliographic record

VenuePLoS ONE · 2020
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPotato Plant Research
Canadian institutionsAgriculture and Agri-Food CanadaUniversité Laval
Fundersnot available
KeywordsSoil waterNutrient managementYield (engineering)Artificial neural networkMathematicsRandom forestPredictive modellingFertilizerAgricultural soil scienceMachine learningAgronomyAgricultural engineeringNutrientEnvironmental scienceStatisticsComputer scienceSoil scienceBiologySoil fertilityEcologyEngineering

Abstract

fetched live from OpenAlex

Statistical modeling is commonly used to relate the performance of potato (Solanum tuberosum L.) to fertilizer requirements. Prescribing optimal nutrient doses is challenging because of the involvement of many variables including weather, soils, land management, genotypes, and severity of pests and diseases. Where sufficient data are available, machine learning algorithms can be used to predict crop performance. The objective of this study was to determine an optimal model predicting nitrogen, phosphorus and potassium requirements for high tuber yield and quality (size and specific gravity) as impacted by weather, soils and land management variables. We exploited a data set of 273 field experiments conducted from 1979 to 2017 in Quebec (Canada). We developed, evaluated and compared predictions from a hierarchical Mitscherlich model, k-nearest neighbors, random forest, neural networks and Gaussian processes. Machine learning models returned R2 values of 0.49-0.59 for tuber marketable yield prediction, which were higher than the Mitscherlich model R2 (0.37). The models were more likely to predict medium-size tubers (R2 = 0.60-0.69) and tuber specific gravity (R2 = 0.58-0.67) than large-size tubers (R2 = 0.55-0.64) and marketable yield. Response surfaces from the Mitscherlich model, neural networks and Gaussian processes returned smooth responses that agreed more with actual evidence than discontinuous curves derived from k-nearest neighbors and random forest models. When conditioned to obtain optimal dosages from dose-response surfaces given constant weather, soil and land management conditions, some disagreements occurred between models. Due to their built-in ability to develop recommendations within a probabilistic risk-assessment framework, Gaussian processes stood out as the most promising algorithm to support decisions that minimize economic or agronomic risks.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.022
Threshold uncertainty score0.116

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.105
GPT teacher head0.216
Teacher spread0.111 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations48
Published2020
Admission routes2
Has abstractyes

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Same venuePLoS ONESame topicPotato Plant ResearchFrench-language works237,207