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Record W3104021046 · doi:10.1016/j.idm.2020.11.002

Law of mass action and saturation in SIR model with application to Coronavirus modelling

2020· article· en· W3104021046 on OpenAlexaff
Théodore Kolokolnikov, David Iron

Bibliographic record

VenueInfectious Disease Modelling · 2020
Typearticle
Languageen
FieldMathematics
TopicCOVID-19 epidemiological studies
Canadian institutionsDalhousie University
Fundersnot available
KeywordsOutbreakEpidemic modelDeath tollSaturation (graph theory)Coronavirus disease 2019 (COVID-19)PopulationSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Exponential functionPhysicsStatistical physicsMathematicsVirologyInfectious disease (medical specialty)DiseaseDemographyMedicineMathematical analysisInternal medicine

Abstract

fetched live from OpenAlex

When using SIR and related models, it is common to assume that the infection rate is proportional to the product of susceptible and infected individuals. While this assumption works at the onset of the outbreak, the infection force saturates as the outbreak progresses, even in the absence of any interventions. We use a simple agent–based model to illustrate this saturation effect. Its continuum limit leads a modified SIR model with exponential saturation. The derivation is based on first principles incorporating the spread radius and population density. We use the data for coronavirus outbreak for the period from March to June, to show that using SIR model with saturation is sufficient to capture the disease dynamics for many jurstictions, including the overall world-wide disease curve progression. Our model suggests the R0 value of above 8 at the onset of infection, but with infection quickly “flattening out”, leading to a long-term sustained sub-exponential spread.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.004
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.005
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.002
Open science0.0020.001
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.256
GPT teacher head0.387
Teacher spread0.131 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations40
Published2020
Admission routes1
Has abstractyes

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