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Record W3109289296 · doi:10.1101/2020.12.02.408989

Historical and cross-disciplinary trends in the biological and social sciences reveal an accelerating adoption of advanced analytics

2020· preprint· en· W3109289296 on OpenAlexaff
Taylor Bolt, Jason S. Nomi, Danilo Bzdok, Lucina Q. Uddin

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2020
Typepreprint
Languageen
FieldComputer Science
TopicData Analysis with R
Canadian institutionsMcGill UniversityMila - Quebec Artificial Intelligence InstituteMontreal Neurological Institute and Hospital
Fundersnot available
KeywordsDisciplinePaceCross disciplinaryCurriculumData scienceAnalyticsSocial network analysisSocial studiesEngineering ethicsComputer scienceSocial scienceSociologyPsychologyMathematics educationEngineeringPedagogyGeography

Abstract

fetched live from OpenAlex

Abstract Methods for data analysis in the biomedical, life and social sciences are developing at a rapid pace. At the same time, there is increasing concern that education in quantitative methods is failing to adequately prepare students for contemporary research. These trends have led to calls for educational reform to undergraduate and graduate quantitative research method curricula. We argue that such reform should be based on data-driven insights into within- and cross-disciplinary use of research methods. Our survey of peer-reviewed literature screened ∼3.5 million openly available research articles to monitor the cross-disciplinary usage of research methods in the past decade. We applied data-driven text-mining analyses to the methods and materials section of a large subset of this corpus to identify method trends shared across disciplines, as well as those unique to each discipline. As a whole, usage of T -test, analysis of variance, and other classical regression-based methods has declined in the published literature over the past 10 years. Machine-learning approaches, such as artificial neural networks, have seen a significant increase in the total share of scientific publications. We find unique groupings of research methods associated with each biomedical, life and social science discipline, such as the use of structural equation modeling in psychology, survival models in oncology, and manifold learning in ecology. We discuss the implications of these findings for education in statistics and research methods, as well as within- and cross-disciplinary collaboration.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.076
metaresearch head score (Gemma)0.165
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Bibliometrics
Consensus categoriesnone
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.965
Threshold uncertainty score0.400

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0760.165
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0350.047
Science and technology studies0.0020.009
Scholarly communication0.0100.014
Open science0.0020.007
Research integrity0.0020.005
Insufficient payload (model declined to judge)0.0050.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.084
GPT teacher head0.314
Teacher spread0.230 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designObservational
DomainMethods
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2020
Admission routes1
Has abstractyes

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