ProvBuild: Improving Data Scientist Efficiency with Provenance (An Extended Abstract)
Bibliographic record
Abstract
Data scientists frequently analyze data by writing scripts. We conducted a contextual inquiry with interdisciplinary researchers, which revealed that parameter tuning is a highly iterative process and that debugging is time-consuming. As analysis scripts evolve and become more complex, analysts have difficulty conceptualizing their workflow. In particular, after editing a script, it becomes difficult to determine precisely which code blocks depend on the edit. Consequently, scientists frequently re-run entire scripts instead of re-running only the necessary parts. We present ProvBuild, a data analysis environment that uses change impact analysis [1] to improve the iterative debugging process in script-based workflow pipelines. ProvBuild is a tool that leverages language-level provenance [2] to streamline the debugging process by reducing programmer cognitive load and decreasing subsequent runtimes, leading to an overall reduction in elapsed debugging time. ProvBuild uses provenance to track dependencies in a script. When an analyst debugs a script, ProvBuild generates a simplified script that contains only the information necessary to debug a particular problem. We demonstrate that debugging the simplified script lowers a programmer’s cognitive load and permits faster re-execution when testing changes. The combination of reduced cognitive load and shorter runtime reduces the time necessary to debug a script. We quantitatively and qualitatively show that even though ProvBuild introduces overhead during a script’s first execution, it is a more efficient way for users to debug and tune complex workflows. ProvBuild demonstrates a novel use of language-level provenance, in which it is used to proactively improve programmer productively rather than merely providing a way to retroactively gain insight into a body of code. To the best of our knowledge, ProvBuild is a novel application of change impact analysis and it is the first debugging tool to leverage language-level provenance to reduce cognitive load and execution time.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.013 | 0.058 |
| Meta-epidemiology (narrow) | 0.001 | 0.001 |
| Meta-epidemiology (broad) | 0.001 | 0.001 |
| Bibliometrics | 0.002 | 0.002 |
| Science and technology studies | 0.002 | 0.003 |
| Scholarly communication | 0.005 | 0.009 |
| Open science | 0.004 | 0.007 |
| Research integrity | 0.001 | 0.003 |
| Insufficient payload (model declined to judge) | 0.008 | 0.003 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".