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Biological Data Classification via Faster MAXimum Feasible Subsystem Algorithm

2021· article· en· W3179186621 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldComputer Science
TopicMachine Learning and Data Classification
Canadian institutionsCarleton University
Fundersnot available
KeywordsHyperparameterComputer scienceNaive Bayes classifierSupport vector machineMachine learningArtificial intelligenceStatistical classificationAlgorithmPrecision and recallLogistic regressionData mining

Abstract

fetched live from OpenAlex

Machine Learning (ML) techniques are the foundation of many next-generation technologies and have been swiftly adopted in a variety of applications in healthcare from prognosis and medical diagnosis to personalized treatment and drug manufacturing. A central model in ML is classification, an important tool for intelligent decision making in medicine such as distinguishing ill patients from a normal population. In this paper, an algorithm using improved solution methods for the MAXimum Feasible Subsystem (MAX FS) problem is applied to biological classification problems in the UCI database. The proposed method is compared with four widely used classification models using 10-fold cross-validation with and without hyperparameter tuning. The proposed method provides higher accuracy in more cases than the comparators and shows promising results for recall-oriented ML tasks since it improves the average recall by 17% when compared to other well-known classifiers such as K-Nearest Neighbours (KNN), Support Vector Machines (SVM), Naive Bayes (NB), and Logistic Regression (LR).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Other design · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.943
Threshold uncertainty score0.861

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.119
GPT teacher head0.313
Teacher spread0.194 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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