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Record W4229030785 · doi:10.1084/jem.20220011

Neutrophil phenotypes and functions in cancer: A consensus statement

2022· review· en· W4229030785 on OpenAlexafffund
Daniela F. Quail, Borko Amulic, Monowar Aziz, Betsy Barnes, Evgeniy Eruslanov, Zvi G. Fridlender, Helen S. Goodridge, Zvi Granot, Andrés Hidalgo, Anna Huttenlocher, Mariana J. Kaplan, Ilaria Malanchi, Taha Merghoub, Etienne Meylan, Vivek Mittal, Mikaël J. Pittet, Andrea Rubio-Ponce, Irina A. Udalova, Timo K. van den Berg, Denisa D. Wagner, Ping Wang, Arturo Zychlinsky, Karin E. de Visser, Mikala Egeblad, Paul Kubes

Bibliographic record

VenueThe Journal of Experimental Medicine · 2022
Typereview
Languageen
FieldImmunology and Microbiology
TopicNeutrophil, Myeloperoxidase and Oxidative Mechanisms
Canadian institutionsUniversity of CalgaryMcGill University
FundersH2020 European Research CouncilCongressionally Directed Medical Research ProgramsNational Institute of Arthritis and Musculoskeletal and Skin DiseasesNational Institute of Allergy and Infectious DiseasesNational Cancer InstituteNational Heart, Lung, and Blood InstituteHorizon 2020 Framework ProgrammeOncode InstituteCanadian Institutes of Health ResearchParker Institute for Cancer ImmunotherapyTerry Fox Research InstituteLudwig Center at HarvardCentro Nacional de Investigaciones CardiovascularesFonds De La Recherche Scientifique - FNRSNorthwell HealthCanada Research ChairsSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungDeutsche ForschungsgemeinschaftCold Spring Harbor LaboratoryNational Institute of General Medical SciencesFrancis Crick InstituteNederlandse Organisatie voor Wetenschappelijk OnderzoekKWF KankerbestrijdingCancer Research UKWellcome TrustMax-Planck-GesellschaftMemorial Sloan-Kettering Cancer CenterSwim Across AmericaLudwig Institute for Cancer ResearchIsrael Science FoundationMedical Research CouncilIsrael Cancer Research FundNational Institutes of HealthRosetrees TrustFondation ISRECMinisterio de Ciencia e InnovaciónEuropean CommissionU.S. Department of DefenseCancer Research InstituteNational Science Foundation
KeywordsInnate immune systemCancerImmunologyBiologyInflammationPopulationImmune systemMedicineGenetics

Abstract

fetched live from OpenAlex

Neutrophils are the first responders to infection and inflammation and are thus a critical component of innate immune defense. Understanding the behavior of neutrophils as they act within various inflammatory contexts has provided insights into their role in sterile and infectious diseases; however, the field of neutrophils in cancer is comparatively young. Here, we summarize key concepts and current knowledge gaps related to the diverse roles of neutrophils throughout cancer progression. We discuss sources of neutrophil heterogeneity in cancer and provide recommendations on nomenclature for neutrophil states that are distinct in maturation and activation. We address discrepancies in the literature that highlight a need for technical standards that ought to be considered between laboratories. Finally, we review emerging questions in neutrophil biology and innate immunity in cancer. Overall, we emphasize that neutrophils are a more diverse population than previously appreciated and that their role in cancer may present novel unexplored opportunities to treat cancer.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.004
Threshold uncertainty score0.023

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.004
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0020.002
Science and technology studies0.0010.001
Scholarly communication0.0020.004
Open science0.0020.002
Research integrity0.0030.006
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.081
GPT teacher head0.361
Teacher spread0.280 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations345
Published2022
Admission routes2
Has abstractyes

Explore more

Same venueThe Journal of Experimental MedicineSame topicNeutrophil, Myeloperoxidase and Oxidative MechanismsFrench-language works237,207