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Validating prediction models for use in clinical practice: concept, steps and procedures

2020· dataset· en· W4245289687 on OpenAlexaff
Mohammad Chowdhury, Tanvir Chowdhury Turin

Bibliographic record

VenueAuthorea · 2020
Typedataset
Languageen
FieldComputer Science
TopicMachine Learning in Healthcare
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsPredictive modellingComputer scienceSet (abstract data type)Clinical PracticeModel validationMachine learningQuality (philosophy)Data miningArtificial intelligenceData scienceMedicine

Abstract

fetched live from OpenAlex

Prediction models are extensively used in numerous areas including clinical settings where a prediction model helps to detect or screen high-risk subjects for early interventions to prevent an adverse outcome, assist in medical decision-making to help both doctors and patients to make an informed choice regarding the treatment, and assist in healthcare services with planning and quality management. There are two main components of prediction modeling: model development and model validation. Once a model is developed using an appropriate modeling strategy, its utility is assessed through model validation. Model validation provides a true test of a model’s predictive ability when the model is applied on an independent data set. A model may show outstanding predictive accuracy in a dataset that was used to develop the model, but its predictive accuracy may decline radically when applied to a different dataset. In the era of precision health where disease prevention through early detection is highly encouraged, accurate prediction of a validated model has become even more important for successful screening. Different clinical practice guidelines also recommend incorporating only those prediction models in clinical practice that has demonstrated good predictive accuracy in multiple validation studies. Our purpose is to introduce the readers with the basic concept of model validation and illustrate the fundamental steps and procedures that are necessary to implement model validation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.043
metaresearch head score (Gemma)0.160
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.957
Threshold uncertainty score0.227

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0430.160
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0040.005
Science and technology studies0.0010.001
Scholarly communication0.0060.004
Open science0.0040.004
Research integrity0.0020.006
Insufficient payload (model declined to judge)0.0080.006

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.112
GPT teacher head0.417
Teacher spread0.305 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designTheoretical or conceptual
DomainMethods
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2020
Admission routes1
Has abstractyes

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