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Record W4301806712 · doi:10.47886/9781934874080.ch6

Challenges for Diadromous Fishes in a Dynamic Global Environment

2009· book-chapter· en· W4301806712 on OpenAlexaboutno aff

Bibliographic record

VenueAmerican Fisheries Society eBooks · 2009
Typebook-chapter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsnot available
Fundersnot available
KeywordsFish migrationBiologyEcologyEstuaryHabitat

Abstract

<em>Abstract</em>.-Postglacial colonization of temperate latitudes by anadromous fishes has frequently resulted in radiation into multiple migration and morphological phenotypes, among which evolutionary relationships are often poorly understood. Freshwater phenotypes may be derived from freshwater forms or independent postglacial colonization by a marine ancestor (i.e., raceme structure). We examined genetic and morphological variation associated with the transition from anadromy to freshwater residency in rainbow smelt <em>Osmerus mordax</em>. Colonization pathways were reconstructed using nine microsatellite loci and mtDNA sequence data, between three pairs of anadromous and adjacent landlocked populations in southeastern Newfoundland. Microsatellite data indicate strong associations between adjacent anadromous and freshwater populations in two of three pairs consistent with independent parallel colonization. In contrast mtDNA sequence analysis suggests little variation and colonization of most of the region by a single glacial race. To explore the independent parallel transition from anadromous to nonanadromous populations, we document a novel estuarine dwarf phenotype inhabiting a partially landlocked fjord (Holyrood Pond) and examine the hypothesis that this estuarine dwarf represents a transitional form between the commonly observed anadromous and freshwater morphs. Habitat reconstructions using LA-ICP-MS and otolith elemental composition from each of the anadromous and freshwater locations as well as Holyrood Pond indicate that Holyrood Pond smelt exist primarily in a stable estuarine environment. Likewise, microsatellite loci show similar levels of diversity and only moderate divergence between nearby anadromous locations and Holyrood Pond. In contrast, morphological and shape variation suggests some similarities between Holyrood Pond and freshwater dwarfs. Comparison of phenotypic and genetic differentiation (i.e., <EM>P</em><sub>ST</sub> and <EM>F</em><sub>ST</sub>) suggest phenotypic convergence among freshwater forms and a greater phenotypic similarity between freshwater and Holyrood Pond dwarfs than between Holyrood Pond and anadromous locations. Estimates of <EM>P</em><sub>ST</sub> were twice those of <EM>F</em><sub>ST</sub> between anadromous and Holyrood Pond smelt consistent with divergence with gene flow. We conclude that postglacial colonization in smelt primarily occurs independently through parallel radiations, and may occur even in the presence of gene flow likely resulting in large variation in migration phenotype and life history.

Stored with the screening record, where it is evidence for the labels above.

How this classification was reachedexpand

The three-model screen

all 5,600 screened works →

All three models called this out of scope.

stratum: about_only · design weight: 3321.24 (the sample is stratified; any rate computed without the weight is wrong)
Claude Opus 4.8OUT
genre: empirical
about Canada: no
confidence: high

Population genetics of smelt colonization; evolutionary biology.

GPT-5.6 (high)OUT
genre: empirical
about Canada: no
confidence: high

This investigates fish evolution and population structure, not research practice.

Grok 4.5OUT
genre: empirical
about Canada: no
confidence: high

Fish population genetics and phenotype evolution of smelt; domain biology.

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.050
Threshold uncertainty score0.000

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0050.004
Scholarly communication0.0050.004
Open science0.0020.005
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0170.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.221
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

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