MétaCan
Menu
Back to cohort
Record W4394872233 · doi:10.31234/osf.io/kytj7

Can we Find Evidence for the Null in a Bayesian t-Test? Not Unless we Reconsider Bayes Factor Thresholds

2024· preprint· en· W4394872233 on OpenAlexaff
Phivos Phylactou, Shuo Chen, David A. Seminowicz, Siobhan M. Schabrun

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldComputer Science
TopicAdvanced Statistical Modeling Techniques
Canadian institutionsParkwood InstituteWestern University
Fundersnot available
KeywordsBayes factorBayesian probabilityNull hypothesisSample size determinationStatisticsEconometricsBayes' theoremStatistical hypothesis testingAlternative hypothesisNull (SQL)Variance (accounting)MathematicsSample (material)PsychologyEconomicsComputer sciencePhysicsData mining

Abstract

fetched live from OpenAlex

Within the fields of behavioural and psychological research, the use of Bayesian statistics has gathered increased interest. A statistical test commonly employed in behavioral and psychological research is the t-test. For the Bayesian t-test, a Bayes Factor (BF) can be computed which reflects evidence in favor of either the alternative hypothesis (H1) or the null hypothesis (H0). Even though the BF is a continuous measure of evidence, it is common to define specific thresholds for accepting the evidence in favor of either the H1 or the H0. Such evidence thresholds (e.g., BF > 3, BF > 6, BF > 10) are adopted by related scientific journals to define minimum publication or preregistration requirements. However, exceeding these thresholds is not analogous when H1 is true compared to when H0 is true. In turn, this disanalogy might require scientists to invest additional time and resources when H0 is true, as opposed to when H1 is true. In this study, we simulated 200 million BFs for various effect size, sample size, and variance assumptions, to demonstrate this disanalogy. Further, we show that despite having small shifts in the sample sizes required for exceeding various BF thresholds when H1 is true, when the H0 is true the probabilities of exceeding a BF > 6 or a BF > 10 are close to chance. As such, we recommend the use of a BF > 3 evidence threshold for the H0 independently of the evidence threshold set for H1.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.190
metaresearch head score (Gemma)0.638
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.810
Threshold uncertainty score0.999

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1900.638
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0050.003
Bibliometrics0.0030.004
Science and technology studies0.0020.020
Scholarly communication0.0110.018
Open science0.0070.004
Research integrity0.0080.013
Insufficient payload (model declined to judge)0.0090.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.153
GPT teacher head0.386
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designTheoretical or conceptual
DomainMethods
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2024
Admission routes1
Has abstractyes

Explore more

Same topicAdvanced Statistical Modeling TechniquesFrench-language works237,207