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Record W4398787865 · doi:10.5376/gab.2024.15.0007

Genetic Mechanism of Cassava Disease Resistance: From Traditional Breeding to CRISPR/Cas Application

2024· article· en· W4398787865 on OpenAlexvenueno aff
Wenzhong Huang, Zhongmei Hong

Bibliographic record

VenueGenomics and Applied Biology · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicCassava research and cyanide
Canadian institutionsnot available
Fundersnot available
KeywordsCRISPRMechanism (biology)BiotechnologyBiologyResistance (ecology)Plant disease resistanceGeneticsAgronomyGene

Abstract

fetched live from OpenAlex

The escalating threat of plant diseases to cassava ( Manihot esculenta ) production necessitates innovative strategies for developing disease-resistant varieties. Traditional breeding has been instrumental in enhancing cassava's resistance to various pathogens, but it is often limited by the complexity of genetic traits and the lengthy timeframes required. The advent of CRISPR/Cas genome editing technology has revolutionized the field of plant breeding by enabling precise modifications of plant genomes. This systematic review provides a comprehensive analysis of the genetic mechanisms underlying cassava disease resistance and the transition from conventional breeding techniques to the cutting-edge CRISPR/Cas applications. We examine the current state of knowledge on plant-pathogen interactions in cassava and discuss how CRISPR/Cas-mediated genome editing has been employed to disrupt these interactions by targeting susceptibility factors within the plant genome. Furthermore, we explore the advancements in genome editing tools, such as base editing and prime editing, that have broadened the scope of generating disease-resistant cassava varieties. The review also highlights the potential of CRISPR/Cas9 in enhancing disease resistance through multiplexed gene editing and trait stacking, which is particularly relevant for complex traits like disease resistance. By synthesizing insights from recent developments in CRISPR/Cas applications across various crops, we aim to provide a roadmap for future research and the development of cassava varieties with improved resistance to a spectrum of diseases, thereby contributing to global food security.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.001
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.238
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2024
Admission routes1
Has abstractyes

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