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Record W4398787865 · doi:10.5376/gab.2024.15.0007

Genetic Mechanism of Cassava Disease Resistance: From Traditional Breeding to CRISPR/Cas Application

2024· article· en· W4398787865 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueGenomics and Applied Biology · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicCassava research and cyanide
Canadian institutionsnot available
Fundersnot available
KeywordsCRISPRMechanism (biology)BiotechnologyBiologyResistance (ecology)Plant disease resistanceGeneticsAgronomyGene

Abstract

fetched live from OpenAlex

The escalating threat of plant diseases to cassava ( Manihot esculenta ) production necessitates innovative strategies for developing disease-resistant varieties. Traditional breeding has been instrumental in enhancing cassava's resistance to various pathogens, but it is often limited by the complexity of genetic traits and the lengthy timeframes required. The advent of CRISPR/Cas genome editing technology has revolutionized the field of plant breeding by enabling precise modifications of plant genomes. This systematic review provides a comprehensive analysis of the genetic mechanisms underlying cassava disease resistance and the transition from conventional breeding techniques to the cutting-edge CRISPR/Cas applications. We examine the current state of knowledge on plant-pathogen interactions in cassava and discuss how CRISPR/Cas-mediated genome editing has been employed to disrupt these interactions by targeting susceptibility factors within the plant genome. Furthermore, we explore the advancements in genome editing tools, such as base editing and prime editing, that have broadened the scope of generating disease-resistant cassava varieties. The review also highlights the potential of CRISPR/Cas9 in enhancing disease resistance through multiplexed gene editing and trait stacking, which is particularly relevant for complex traits like disease resistance. By synthesizing insights from recent developments in CRISPR/Cas applications across various crops, we aim to provide a roadmap for future research and the development of cassava varieties with improved resistance to a spectrum of diseases, thereby contributing to global food security.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.817
Threshold uncertainty score0.170

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.238
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it