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Record W4400356552 · doi:10.1016/j.oneear.2024.06.002

CoBacFM: Core bacteria forecast model for global grassland pH dynamics under future climate warming scenarios

2024· article· en· W4400356552 on OpenAlexaff
Kai Feng, Shang Wang, Qing He, Michael Bonkowski, Mohammad Bahram, Étienne Yergeau, Zhu‐Jun Wang, Xi Peng, Danrui Wang, Shuzhen Li, Yingcheng Wang, Zhicheng Ju, Xiongfeng Du, Chengliang Yan, Songsong Gu, Tong Li, Xingsheng Yang, Wenli Shen, Ziyan Wei, Qiulong Hu, Pengfei Li, Yanmei Zhu, Guangxin Lu, Clara Qin, Gengxin Zhang, Chunwang Xiao, Yunfeng Yang, Jizhong Zhou, Ye Deng

Bibliographic record

VenueOne Earth · 2024
Typearticle
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsInstitut National de la Recherche Scientifique
FundersNational Key Research and Development Program of ChinaChina Postdoctoral Science FoundationNational Natural Science Foundation of ChinaNational Science Foundation
KeywordsGrasslandEnvironmental scienceBiogeochemical cycleClimate changeGlobal warmingGlobal changeAtmospheric sciencesEcologyBiologyGeology

Abstract

fetched live from OpenAlex

Soil microbes regulate various biogeochemical cycles on Earth and respond rapidly to climate change, which is accompanied by changes in soil pH. However, the long-term patterns of these changes under future climate scenarios remain unclear. We propose a core-bacteria-forecast model (CoBacFM) to model soil pH changes by shifts of core bacterial groups under future scenarios using a curated soil microbiota dataset of global grasslands. Our model estimates that soil pH will increase in 63.8%–67.0% of grassland regions and decrease in 10.1%–12.4% of regions. Approximately 32.5%–32.9% of regions will become more alkaline by 5.6%, and these areas expand in all future scenarios. These results were supported by 14 warming simulation experiments. Using bacterial responses as bioindicators of soil pH, the CoBacFM method can accurately forecast pH changes in future scenarios, and the changing global climate is likely to result in the alkalization of grasslands.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.045
Threshold uncertainty score0.089

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.255
Teacher spread0.231 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations26
Published2024
Admission routes1
Has abstractyes

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