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Record W4401432947 · doi:10.5376/jtsr.2024.14.0007

Genomic Insights into the Evolutionary History of the <i>Camellia</i> Genus: Comprehensive Analysis of Phylogenetic Relationships, Speciation, and Adaptive Evolution

2024· article· en· W4401432947 on OpenAlexvenueno aff
Xinzhuan Yao, Hua Tang, Yujie Jiao, Yumei He, Litang Lu

Bibliographic record

VenueJournal of Tea Science Research · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant and Fungal Species Descriptions
Canadian institutionsnot available
Fundersnot available
KeywordsPhylogenetic treeGenetic algorithmEvolutionary biologyBiologyGenusPhylogeneticsCamelliaAdaptive evolutionGeneticsZoologyBotanyGene

Abstract

fetched live from OpenAlex

This study aims to synthesize current genomic research to elucidate the evolutionary history of the Camellia genus.By integrating various studies, it provides comprehensive insights into the genetic and evolutionary mechanisms that have shaped the diversity and adaptation of Camellia species.Genomic research has significantly advanced the understanding of the Camellia genus, revealing the genetic basis of adaptive traits and the mechanisms by which Camellia plants thrive in diverse ecological niches.Comparative chloroplast genomics has identified sequence polymorphisms and divergent hotspots that are valuable for phylogenetic analysis and species identification.The draft genome of tea (Camellia sinensis var.sinensis) highlighted two whole-genome duplications and the evolution of gene families critical for tea quality.Transcriptomic analysis of 116 Camellia plants provided evidence of a recent whole-genome duplication and identified gene families associated with stress resistance and secondary metabolism.The study found that hybridization events have significantly contributed to increased genetic diversity and adaptability.Additionally, the practical applications of genomic research in breeding programs have been demonstrated, leading to the development of new cultivars with improved traits.The integration of genomic, transcriptomic, and chloroplast data provides profound insights into the evolutionary history of the Camellia genus.These findings are crucial for developing effective conservation strategies and optimizing breeding programs to ensure the sustainability and economic viability of Camellia species, promoting the conservation and utilization of Camellia plants.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.002
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.049
GPT teacher head0.289
Teacher spread0.239 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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