MétaCan
Menu
Back to cohort
Record W4401433137 · doi:10.5376/mpr.2024.14.0003

Genomic Analysis of Yam: Understanding Its Adaptive Evolution and Medicinal Properties

2024· article· en· W4401433137 on OpenAlexvenueno aff
Sufang An, Yongliang Yu, Zhengwei Tan, Chunming Li, Qing Yang, Yang Hong-qi, Xiaoyu Su, Yao Sun, Huizhen Liang

Bibliographic record

VenueMedicinal Plant Research · 2024
Typearticle
Languageen
FieldMedicine
TopicPhytochemical and Pharmacological Studies
Canadian institutionsnot available
FundersHenan Academy of Agricultural Sciences
KeywordsEvolutionary biologyBiologyComputational biologyAdaptive evolutionBiotechnologyGeneticsGene

Abstract

fetched live from OpenAlex

Yam, commonly known as Shuyu, Tushu, or Shuyao in Chinese, is a traditional Chinese medicinal and edible plant with nutritional and medicinal value.This study aims to elucidate the adaptive evolution and medicinal properties of yam through comprehensive genomic analysis.The study integrates findings from various research efforts, including transcriptome sequencing, chloroplast genome characterization, and metabolomic profiling.Transcriptome analysis has revealed key pathways and hormone activities involved in microtuber formation, highlighting the role of differentially expressed genes in the plant's development and stress responses.Chloroplast genome sequencing has provided insights into the phylogenetic relationships and potential molecular markers for species identification.Metabolomic studies have identified significant metabolites in different parts of the plant, contributing to its medicinal properties.Additionally, the structural characterization of polysaccharides and their bioactivity on gut microbiota underscores the plant's health benefits.The identification of endogenous gibberellins and α-glucosidase inhibitors further supports the plant's therapeutic potential.This study consolidates current genomic and biochemical data, offering a comprehensive understanding of yam's adaptive evolution and medicinal properties, thereby providing references for future research and potential biotechnological applications.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.406
GPT teacher head0.420
Teacher spread0.015 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2024
Admission routes1
Has abstractyes

Explore more

Same venueMedicinal Plant ResearchSame topicPhytochemical and Pharmacological StudiesFrench-language works237,207