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Record W4409348813 · doi:10.1063/4.0000404

Sharing our Excitement for Structural Science Through our Trainees

2025· article· en· W4409348813 on OpenAlexaffabout
Gerald F. Audette

Bibliographic record

VenueStructural Dynamics · 2025
Typearticle
Languageen
FieldEngineering
TopicExperimental Learning in Engineering
Canadian institutionsYork University
Fundersnot available
KeywordsComputer scienceData science

Abstract

fetched live from OpenAlex

One of the most important means by which we can share our enthusiasm for structural science is through our trainees. Our students, both undergraduate and graduate, and postdoctoral researchers in our groups gain more than just technical skills through our interactions, they gain their own appreciation and excitement for science that they then can spread through their connections and contacts. We play an important role in garnering that excitement, fostering inquiry, and passing on that excitement to others. We often recount where our enthusiasm began, that one Professor or colleague whose excitement was infectious. In the Canadian context, Professor Michael James (1940-2023) was such a figure. Throughout his career, Michael’s excitement, and passion for the structural study of proteins, particularly proteolytic enzymes, fostered many who now continue that legacy and look to pass-on that excitement through their own interactions with trainees. This talk is a short remembrance of Michael, and others, who fostered that excitement in myself and others.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.011
metaresearch head score (Gemma)0.027
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.026
Threshold uncertainty score0.087

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0110.027
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0010.001
Science and technology studies0.0110.009
Scholarly communication0.0140.009
Open science0.0020.019
Research integrity0.0040.015
Insufficient payload (model declined to judge)0.0260.015

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.298
Teacher spread0.289 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2025
Admission routes2
Has abstractyes

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