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Record W4411189102 · doi:10.1186/s40708-025-00261-2

Detecting label noise in longitudinal Alzheimer’s data with explainable artificial intelligence

2025· article· en· W4411189102 on OpenAlexfundno aff
Paolo Sorino, Angela Lombardi, Domenico Lofù, Tommaso Colafiglio, Antonio Ferrara, Fedelucio Narducci, Eugenio Di Sciascio, Tommaso Di Noia

Bibliographic record

VenueBrain Informatics · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBiomedical Text Mining and Ontologies
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchGenentechNational Institutes of HealthNorthern California Institute for Research and EducationServierBioClinicaU.S. Department of DefenseAlzheimer's Disease Neuroimaging InitiativeUniversity of Southern CaliforniaBristol-Myers SquibbEli Lilly and CompanyBiogenEisaiNational Institute on AgingAlzheimer's Association
KeywordsNoise (video)Artificial intelligencePattern recognition (psychology)Longitudinal dataComputer scienceMachine learningData mining

Abstract

fetched live from OpenAlex

Reliable classification of cognitive states in longitudinal Alzheimer's Disease (AD) studies is critical for early diagnosis and intervention. However, inconsistencies in diagnostic labeling, arising from subjective assessments, evolving clinical criteria, and measurement variability, introduce noise that can impact machine learning (ML) model performance. This study explores the potential of explainable artificial intelligence to detect and characterize noisy labels in longitudinal datasets. A predictive model is trained using a Leave-One-Subject-Out validation strategy, ensuring robustness across subjects while enabling individual-level interpretability. By leveraging SHapley Additive exPlanations values, we analyze the temporal variations in feature importance across multiple patient visits, aiming to identify transitions that may reflect either genuine cognitive changes or inconsistencies in labeling. Using statistical thresholds derived from cognitively stable individuals, we propose an approach to flag potential misclassifications while preserving clinical labels. Rather than modifying diagnoses, this framework provides a structured way to highlight cases where diagnostic reassessment may be warranted. By integrating explainability into the assessment of cognitive state transitions, this approach enhances the reliability of longitudinal analyses and supports a more robust use of ML in AD research.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.014
metaresearch head score (Gemma)0.054
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.014
Threshold uncertainty score0.072

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0140.054
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0010.002
Scholarly communication0.0020.002
Open science0.0010.002
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.082
GPT teacher head0.340
Teacher spread0.258 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2025
Admission routes1
Has abstractyes

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