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Record W4414615361 · doi:10.7717/peerj-cs.3208

Transformers and capsule networks <i>vs</i> classical ML on clinical data for alzheimer classification

2025· article· en· W4414615361 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

fundA Canadian funder is recorded on the work.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenuePeerJ Computer Science · 2025
Typearticle
Languageen
FieldComputer Science
TopicMachine Learning in Healthcare
Canadian institutionsnot available
FundersNational Institute of Biomedical Imaging and BioengineeringCanadian Institutes of Health ResearchGE HealthcareAgenția Națională pentru Cercetare și DezvoltareIXICONational Institutes of HealthH. Lundbeck A/SServierNational Institute on AgingAlzheimer's AssociationUniversidad de CaldasBiogenRocheEli Lilly and CompanyNovartis Pharmaceuticals Corporation
KeywordsInterpretabilityOversamplingDementiaConvolutional neural networkDeep learningFeature selectionBoosting (machine learning)CognitionNeuroimaging

Abstract

fetched live from OpenAlex

Alzheimer’s disease (AD) is a progressive neurodegenerative disorder and the leading cause of dementia worldwide. Although clinical examinations and neuroimaging are considered the diagnostic gold standard, their high cost, lengthy acquisition times, and limited accessibility underscore the need for alternative approaches. This study presents a rigorous comparative analysis of traditional machine learning (ML) algorithms and advanced deep learning (DL) architectures that that rely solely on structured clinical data, enabling early, scalable AD detection. We propose a novel hybrid model that integrates a convolutional neural networks (CNNs), DigitCapsule-Net, and a Transformer encoder to classify four disease stages—cognitively normal (CN), early mild cognitive impairment (EMCI), late mild cognitive impairment (LMCI), and AD. Feature selection was carried out on the ADNI cohort with the Boruta algorithm, Elastic Net regularization, and information-gain ranking. To address class imbalance, we applied three oversampling techniques: synthetic minority oversampling technique (SMOTE), oversample using adaptive synthetic (ADASYN), and SMOTE-Tomek. In the three-class setting, the CNN + DigitCapsule-Net hybrid attained 90.58% accuracy, outperforming state-of-the-art baselines that rely only on clinical variables. A tuned gradient boosting (GB) model achieved comparable performance with substantially lower computational requirements. Model interpretability was assessed with SHAP and gradient-weighted class activation map (Grad-CAM), which identified Clinical Dementia Rating-Sum of Boxes (CRD-SB), Logical Memory-Delayed Recall Total Number of Story Units Recalled (LDELTOTAL), and Modified Preclinical Alzheimer Cognitive Composite with Trails B (mPACC-TrailsB) as the most informative clinical features. This combination of predictive strength, computational efficiency, and transparent interpretation positions the proposed approach as a promising open-source tool for facilitating early AD diagnosis in clinical settings.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.929
Threshold uncertainty score0.762

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0040.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0040.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.135
GPT teacher head0.425
Teacher spread0.290 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it