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Record W4415464057 · doi:10.1038/s41467-025-64658-7

Selecting fitted models under epistemic uncertainty using a stochastic process on quantile functions

2025· article· en· W4415464057 on OpenAlexafffund
Alexandre René, André Longtin

Bibliographic record

VenueNature Communications · 2025
Typearticle
Languageen
FieldComputer Science
TopicGaussian Processes and Bayesian Inference
Canadian institutionsGeneral Dynamics (Canada)University of Ottawa
FundersNatural Sciences and Engineering Research Council of CanadaBundesministerium für Bildung und ForschungEuropean CommissionGovernment of Ontario
KeywordsContext (archaeology)Selection (genetic algorithm)Model selectionNonparametric statisticsReplication (statistics)QuantileProcess (computing)Value (mathematics)

Abstract

fetched live from OpenAlex

Fitting models to data is an important part of the practice of science. Advances in machine learning have made it possible to fit more-and more complex-models, but have also exacerbated a problem: when multiple models fit the data equally well, which one(s) should we pick? The answer depends entirely on the modelling goal. In the scientific context, the essential goal is replicability: if a model works well to describe one experiment, it should continue to do so when that experiment is replicated tomorrow, or in another laboratory. The selection criterion must therefore be robust to the variations inherent to the replication process. In this work we develop a nonparametric method for estimating uncertainty on a model's empirical risk when replications are non-stationary, thus ensuring that a model is only rejected when another is reproducibly better. We illustrate the method with two examples: one a more classical setting, where the models are structurally distinct, and a machine learning-inspired setting, where they differ only in the value of their parameters. We show how, in this context of replicability or "epistemic uncertainty", it compares favourably to existing model selection criteria, and has more satisfactory behaviour with large experimental datasets.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.045
metaresearch head score (Gemma)0.138
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.045
Threshold uncertainty score0.240

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0450.138
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0030.003
Bibliometrics0.0030.002
Science and technology studies0.0010.005
Scholarly communication0.0030.004
Open science0.0040.005
Research integrity0.0030.004
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.337
Teacher spread0.298 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2025
Admission routes2
Has abstractyes

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