Consistent and Precise Description of Research Outputs Could Improve Implementation of Open Science
Bibliographic record
Abstract
In 2013, the Center for Open Science proposed that journal articles be awarded “badges” for engaging in open-science practices, including preregistration. In 2015, the Transparency and Openness Promotion (TOP) guidelines (TOP 2015) promoted preregistration of studies and analysis plans. Since then, the term “preregistration” has been used to describe different research outputs created at different times—sometimes, but not always, including study registration. Following a review of evidence about TOP 2015 implementation, including evidence that adherence could not be rated reliably, the TOP Guidelines Advisory Board updated these guidelines (TOP 2025). The TOP 2025 guidelines no longer use the term “preregistration.” Instead, TOP 2025 disambiguates specific research outputs, such as registrations, study protocols, analysis plans, code, and other research materials. TOP 2025 also explains that researchers should describe the time at which outputs are created and shared in relation to key study activities. In this article, we explain why adopting the terminology used in TOP 2025 and describing the times at which specific research outputs are created and shared will enhance understanding and support better implementation and reporting of open science.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.828 | 0.900 |
| Meta-epidemiology (narrow) | 0.004 | 0.005 |
| Meta-epidemiology (broad) | 0.007 | 0.009 |
| Bibliometrics | 0.029 | 0.026 |
| Science and technology studies | 0.008 | 0.019 |
| Scholarly communication | 0.037 | 0.054 |
| Open science | 0.009 | 0.034 |
| Research integrity | 0.010 | 0.021 |
| Insufficient payload (model declined to judge) | 0.008 | 0.005 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".