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Record W4417152959 · doi:10.1186/s40708-025-00283-w

Learning image derived PDE-phenotypes from fMRI data

2025· article· en· W4417152959 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueBrain Informatics · 2025
Typearticle
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsAlberta Children's HospitalUniversity of CalgaryMacEwan University
FundersNatural Sciences and Engineering Research Council of CanadaMacEwan University
KeywordsPattern recognition (psychology)Principal component analysisDimensionality reductionNonlinear dimensionality reductionCurse of dimensionalityBasis (linear algebra)Nonlinear systemArtificial neural networkSparse approximationIndependent component analysis

Abstract

fetched live from OpenAlex

Partial differential equations (PDEs) model various physical phenomena, such as electromagnetic fields and fluid mechanics. Methods such as sparse identification of nonlinear dynamics (SINDy) and PDE-Net 2.0 have been developed to identify and model PDEs on the basis of data via sparse optimization and deep neural networks, respectively. While PDE models are less commonly applied to fMRI data, they have the potential to uncover hidden connections and essential components in brain activity. Using the ADHD200 dataset, we applied canonical independent component analysis (CanICA) and uniform manifold approximation (UMAP) for dimensionality reduction of fMRI data. We then used sparse ridge regression to identify PDEs from the reduced data, and applied significant PDE features for classification achieving high accuracy in distinguishing individuals with attention deficit hyperactivity disorder (ADHD). This study demonstrates a novel approach for extracting meaningful features from fMRI data for neurological disorder analysis to understand the role of oxygen transport (delivery & consumption) in the brain during neural activity, which is relevant for studying intracranial pathologies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.038
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.252
Threshold uncertainty score0.970

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.038
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.040
GPT teacher head0.288
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it