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Record W607944013 · doi:10.11575/prism/31274

A Pilot Study into the Usability of a Scientific Workflow Construction Tool

2007· article· en· W607944013 on OpenAlexaff
Paul M. K. Gordon, Christoph W. Sensen

Bibliographic record

VenuePRISM (University of Calgary) · 2007
Typearticle
Languageen
FieldDecision Sciences
TopicScientific Computing and Data Management
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsWorkflowUsabilityComputer scienceHuman–computer interactionSoftware engineeringTask (project management)User interfaceData scienceWorld Wide WebEngineeringProgramming languageSystems engineeringDatabase

Abstract

fetched live from OpenAlex

We describe a recent pilot study into the usability of the scientific workflow creation and enactment tool called Taverna. Both programmers and non-programmers were used as subjects for a defined programming task. We used a combination of user observation and questionnaires to determine programming efficiency roadblocks in the tool. More generally, differences between the roadblocks encountered by programmers and nonprogrammers suggest that pilot studies are crucial to inform the proper evaluation of novice programming tools. The study also suggests that there is a high demand for reusable Life Sciences workflows, due to both their ability to facilitate human-human communication about data analysis, and their ability to simplify repetitive operations used by bench scientists. Most roadblocks to Taverna programming are interface related, but a more fundamental issue is related to data input and type enforcement. Despite UI issues, we discovered users willingness to re-use and modify workflows, which leads us to suggest that programs first be created in simpler tools as a stepping stone in end-user development for the Life Sciences.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.019
metaresearch head score (Gemma)0.050
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.019
Threshold uncertainty score0.099

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0190.050
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.000
Science and technology studies0.0020.001
Scholarly communication0.0020.003
Open science0.0020.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.060
GPT teacher head0.293
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2007
Admission routes1
Has abstractyes

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