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Record W6990015558

CTP: Phosphoethanolamine Cytidylyltransferase (Pcyt2) Deficiency in The Development of Non-Alcoholic Fatty Liver Disease

2023· dissertation· en· W6990015558 on OpenAlexaff

Bibliographic record

VenueThe Atrium (University of Guelph) · 2023
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBiological Research and Disease Studies
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsSkeletal muscleAdipose tissueGlucose homeostasisSteatohepatitisGlycogenCarbohydrate metabolismFatty liverTranscriptomeHomeostasisLipid metabolism
DOInot available

Abstract

fetched live from OpenAlex

Phosphatidylethanolamine (PE) is the most abundant phospholipid on the inner leaflet of cellular membranes, and the dysregulation of PE homeostasis is increasingly associated with metabolic disease. The major pathway responsible for PE synthesis is the CDP-Ethanolamine Kennedy pathway, in which CTP: Phosphoethanolamine cytidylyltransferase (Pcyt2) is the rate limiting enzyme. Mice with the heterozygous deletion of Pcyt2 (Pcyt2+/-) show reduced flux through the CDP-Ethanolamine pathway and develop adult-onset obesity. In this thesis we probe the metabolic consequences of Pcyt2 deficiency in the liver and skeletal muscle of Pcyt2+/- mice. Young Pcyt2+/- mice exhibit hepatic gene and protein expression changes in metabolic regulators but exhibit no symptoms of disease. By 6-8 months of age, Pcyt2+/- mice show impaired systemic fatty acid (FA) mobilization and insulin resistance, and perturbations to liver and skeletal muscle FA and glucose metabolism that results in the development of non-alcoholic steatohepatitis (NASH). The Pcyt2+/- liver exhibits increased glucose production, an accumulation of TAG and glycogen, fibrosis, and inflammation. In addition, there are significant alterations in DNA hypo- and hypermethylation in the Pcyt2+/- liver. Differentially methylated and expressed genes show a significant enrichment in pathways related to FA and glucose metabolism and liver health indicating that alterations in the epigenome and transcriptome likely underly NASH pathogenesis in Pcyt2+/- mice. Pcyt2+/- skeletal muscle shows signs of disturbed muscle structure and function with an infiltration of macrophages, development of fibrosis, the accumulation DAG and TAG, and infiltration of intramuscular adipose tissue. Pcyt2+/- skeletal muscle exhibits elevated lipogenesis, reduced FA oxidation, and altered glucose metabolism with elevated glycogen content, impaired insulin signaling and reduced glucose uptake. Lastly, we demonstrate that treatment with the Pcyt2 substrate phosphoethanolamine was able to reverse aberrant DNA methylation and multiple aspects of Pcyt2+/- NASH, showing its therapeutic potential and proof of concept data on the role of methylation in the development of Pcyt2+/- NASH. Together, this thesis shows the consequences of Pcyt2 deficiency within the liver and skeletal muscle, which cause perturbed lipid and glucose metabolism, inflammation, the accumulation of DAG, TAG and glycogen, aberrant hepatic DNA methylation, and the development of non-alcoholic fatty liver disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.263
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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