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Record W7005712033

The role of inducible costimulator-mediated phosphoinositide 3-kinase activation in the differentiation and function of follicular helper T cells

2014· dissertation· en· W7005712033 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

fundA Canadian funder is recorded on the work.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueeScholarship@McGill (McGill) · 2014
Typedissertation
Languageen
FieldEngineering
TopicRadar Systems and Signal Processing
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchKorea Science and Engineering Foundation
KeywordsGerminal centerCD28T cellB cellAntibodyPI3K/AKT/mTOR pathwayAffinity maturationCD40Cell
DOInot available

Abstract

fetched live from OpenAlex

Antibodies are crucial components of the adaptive immune arsenal against invading pathogens. Production of high-affinity class-switched antibodies relies on follicular helper T (Tfh) cells, a distinct subset of CD4 helper T cells that migrate into B cell follicles and promote B cell differentiation into plasma cells during germinal center (GC) reactions. The CD28-like costimulatory receptor Inducible Costimulator (ICOS) is expressed on the surface of activated T cells and is crucial for the generation of Tfh cells in mice and humans, but the molecular mechanisms remained unknown. ICOS had been known as a potent activator of phosphoinositide 3-kinase (PI3K), but the role of ICOS-mediated PI3K activation in T cells has been poorly understood. The work presented here is a compilation of two studies that highlight the unique role of PI3K in ICOS-mediated Tfh cell differentiation and function. In the first study, presented in Chapter II, I analyzed a knock-in strain of mice possessing a point mutation in the cytoplasmic tail of ICOS that prevents binding of PI3K (ICOS-YF). I show that ICOS-mediated PI3K activation is crucial for the generation of Tfh cells, and in turn, GC formation, antibody class-switch, and affinity maturation. The ICOS-PI3K axis was crucial for the potentiation of T cell receptor (TCR)-mediated expression of IL-21 and IL-4, key cytokines involved in T cell-mediated B cell help. I also show data that strongly suggests that ICOS and CD28 have differential roles in the multistep process of Tfh cell differentiation, where CD28 is mainly involved in the early expansion of CD4 T cells through non-PI3K signaling mechanisms, while ICOS is involved in the later stages of Tfh cell differentiation in a PI3K-dependent manner. In the study presented in Chapter III, I show that ICOS costimulation enhances TCR-mediated activation of the key translation mediators 4E-BP1 and S6K, in a manner dependent on PI3K. Consistently, I show that the ICOS-PI3K axis enhances the formation of polysomes on IL-4 mRNA. Using an in vitro T-B cell co-culture system, I provide evidence that ICOS mutant CD4 T cells have impaired ability to induce B cell differentiation due to a limited production of IL-4. These findings suggest that ICOS-PI3K signaling facilitates targeted delivery of IL-4 from helper T cells to cognate B cells during T cell-B cell interactions in the GC. Thus, I demonstrate that PI3K is a key downstream signaling component in ICOS signaling during Tfh cell generation. I also show that ICOS-PI3K signaling can alter translational efficiency of pre-existing mRNAs suggesting ICOS' potential role in regulating the function of Tfh cells.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.052
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.188
Teacher spread0.182 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it